C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006NO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127946-ENSG00000006606 CGP 9606 7:75533300-75789896
GeneTranscriptPositionBiotype
ENSG00000006606 (CCL26)
chemokine (C-C motif) ligand 26 		ENST00000005180 (CCL26-001) 75769533-75772257 protein_coding
ENST00000394905 (CCL26-002) 75769533-75789896 protein_coding
ENSG00000127946 (HIP1)
huntingtin interacting protein 1 		ENST00000336926 (HIP1-001) 75533300-75738947 protein_coding
ENST00000404944 (HIP1-005) 75558222-75563385 retained_intron
ENST00000420909 (HIP1-004) 75582092-75611843 protein_coding
ENST00000434438 (HIP1-002) 75534088-75738941 protein_coding
ENST00000479835 (HIP1-003) 75733460-75738962 processed_transcript
ENST00000485723 (HIP1-007) 75654413-75738935 processed_transcript
ENST00000616821 (HIP1-201) 75538083-75611702 protein_coding
ENSG00000279996 (CTB-139P11.2)
 ENST00000623029 (CTB-139P11.2-001) 75625089-75626970 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0006NO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039959-ENSMUSG00000070464 CGP 10090 5:135406523-135563569
GeneTranscriptPositionBiotype
ENSMUSG00000039959 (Hip1)
huntingtin interacting protein 1 		ENSMUST00000060311 (Hip1-201) 135406523-135545122 protein_coding
ENSMUSG00000070464 (Ccl26)
chemokine (C-C motif) ligand 26 		ENSMUST00000094226 (Ccl26-201) 135560448-135563569 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NO_0001ENSG00000006606ENST00000005180ENST00000394905ENSG00000127946ENST00000336926ENST00000404944ENST00000420909ENST00000434438ENST00000479835ENST00000485723ENST00000616821ENSG00000279996ENST00000623029CIL_0006NO_0002ENSMUSG00000039959ENSMUST00000060311ENSMUSG00000070464ENSMUST00000094226
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NO_0001ENSG00000006606ENST00000005180ENST00000394905ENSG00000127946ENST00000336926ENST00000404944ENST00000434438ENST00000616821ENSG00000279996ENST00000623029CIL_0006NO_0002ENSMUSG00000039959ENSMUST00000060311ENSMUSG00000070464ENSMUST00000094226
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006606 ENST00000005180 0.175±0.00 0.184±0.00 N/A 0.041±0.00 0.237±0.19 0.176±0.00 0.142±0.00 0.414±0.00 0.163±0.00 0.657±0.00 0.504±0.00 2.487±1.81 0.265±0.09 0.323±0.00
ENST00000394905 N/A N/A N/A N/A 0.227±0.00 N/A 0.202±0.00 N/A N/A N/A N/A 1.384±0.50 N/A 0.381±0.00
ENSG00000127946 ENST00000336926 7.135±0.00 4.145±0.00 1.465±0.00 1.695±1.22 1.865±1.57 2.288±0.00 3.039±0.00 3.553±0.00 0.554±0.02 7.244±0.00 0.558±0.19 2.214±1.51 4.588±2.28 N/A
ENST00000404944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.404±0.00
ENST00000420909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434438 N/A N/A N/A 0.883±0.00 0.918±0.00 N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616821 N/A N/A 2.247±0.00 1.014±0.00 2.144±0.00 0.701±0.00 1.105±0.00 N/A 1.666±0.00 3.356±0.00 N/A 1.749±0.58 3.689±0.00 20.726±14.99
ENSG00000279996 ENST00000623029 0.027±0.00 0.112±0.00 0.338±0.00 0.037±0.01 0.141±0.06 0.073±0.00 0.113±0.00 0.137±0.00 0.268±0.00 0.142±0.13 N/A 0.072±0.03 N/A 0.046±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039959 ENSMUST00000060311 14.821±2.95 3.180±1.05 8.550±0.31 7.468±2.64 7.210±3.03 2.220±0.21 5.432±0.26 2.857±0.64 0.690±0.30 17.046±1.81 2.657±1.04 10.113±2.44 2.305±1.85 3.829±0.91
ENSMUSG00000070464 ENSMUST00000094226 N/A N/A N/A 0.586±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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