C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisomal biogenesis factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127980 PEX1 9606 - 7:92487020-92528531 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000248633 PEX1-001 92487020-92528531 protein_coding
  ENST00000422866 PEX1-010 92504887-92517415 nonsense_mediated_decay
  ENST00000428214 PEX1-004 92487457-92528435 protein_coding
  ENST00000438045 PEX1-002 92487020-92528441 protein_coding
  ENST00000469417 PEX1-007 92489372-92490246 retained_intron
  ENST00000476923 PEX1-009 92510865-92513967 retained_intron
  ENST00000477342 PEX1-008 92487290-92489794 retained_intron
  ENST00000484913 PEX1-003 92487297-92528439 retained_intron
  ENST00000496092 PEX1-006 92501768-92503064 retained_intron
  ENST00000496420 PEX1-005 92487026-92507823 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248633ENST00000428214ENST00000438045ENST00000469417ENST00000484913ENST00000496420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248633 1.974±0.00 1.665±0.00 N/A 3.025±0.00 1.780±0.54 N/A 0.902±0.16 2.010±0.74 1.800±0.73 1.887±0.00 N/A 4.241±1.41 N/A 3.645±0.00
ENST00000428214 N/A N/A 2.371±0.00 2.568±0.00 N/A 1.663±0.00 N/A N/A N/A N/A 1.448±0.25 N/A N/A 2.631±0.00
ENST00000438045 N/A N/A N/A N/A N/A N/A N/A 4.174±0.00 1.659±0.00 N/A 2.413±0.00 5.785±0.00 1.839±0.00 2.761±0.00
ENST00000469417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.286±0.00 N/A 20.438±0.00
ENST00000484913 N/A N/A N/A N/A N/A 1.515±0.00 1.741±0.00 N/A N/A 1.479±0.00 1.677±0.00 N/A 1.084±0.08 N/A
ENST00000496420 N/A 1.431±0.00 N/A 1.480±0.00 1.294±0.00 1.590±0.00 N/A 0.997±0.00 N/A 1.146±0.02 N/A 2.390±0.17 N/A 1.730±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IMP:IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005777 IDA:IEA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005829 IDA cytosol
GO:0006200 IEA ATP catabolic process
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006625 IMP protein targeting to peroxisome
GO:0007031 IMP:IEA peroxisome organization
GO:0008022 IPI protein C-terminus binding
GO:0009378 IEA four-way junction helicase activity
GO:0016558 IMP protein import into peroxisome matrix
GO:0032403 IDA protein complex binding
GO:0042623 IMP ATPase activity, coupled
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0060152 IMP microtubule-based peroxisome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076647 pex1 peroxisome biogenesis factor 1 protein_coding Danio_rerio
ENSMUSG00000005907 Pex1 peroxisomal biogenesis factor 1 protein_coding Mus_musculus

Loading