C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisomal biogenesis factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005907 Pex1 10090 + 5:3596066-3637232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006061 Pex1-001 3596066-3637230 protein_coding
  ENSMUST00000121291 Pex1-002 3596066-3637232 protein_coding
  ENSMUST00000123268 Pex1-005 3604822-3606121 retained_intron
  ENSMUST00000126545 Pex1-006 3606202-3620711 protein_coding
  ENSMUST00000142516 Pex1-004 3596199-3605862 protein_coding
  ENSMUST00000143132 Pex1-007 3618898-3624505 nonsense_mediated_decay
  ENSMUST00000143959 Pex1-003 3609619-3618117 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000006061ENSMUST00000121291
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000006061 3.510±0.00 N/A N/A 2.758±0.00 2.040±0.02 3.097±0.11 3.560±0.07 1.988±0.00 N/A 4.139±0.33 N/A
ENSMUST00000121291 2.985±0.07 2.425±0.08 5.134±0.66 2.845±0.00 N/A 3.285±0.30 3.393±0.82 2.265±0.00 2.187±0.00 10.958±1.99 7.660±2.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005777 IDA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005829 IEA cytosol
GO:0006200 IEA ATP catabolic process
GO:0006625 IEA protein targeting to peroxisome
GO:0008022 IEA protein C-terminus binding
GO:0008289 IEA lipid binding
GO:0016558 IEA protein import into peroxisome matrix
GO:0032403 IEA protein complex binding
GO:0042623 IEA ATPase activity, coupled
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0060152 IEA microtubule-based peroxisome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076647 pex1 peroxisome biogenesis factor 1 protein_coding Danio_rerio
ENSG00000127980 PEX1 peroxisomal biogenesis factor 1 protein_coding Homo_sapiens

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