C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha 1,4-galactosyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128274 A4GALT 9606 - 22:42692121-42721298 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249005 A4GALT-001 42692121-42695633 protein_coding
  ENST00000381278 A4GALT-003 42692122-42695633 protein_coding
  ENST00000401850 A4GALT-004 42692121-42694986 protein_coding
  ENST00000465765 A4GALT-002 42695171-42721298 processed_transcript
  ENST00000483026 A4GALT-005 42693971-42695633 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249005ENST00000381278ENST00000401850ENST00000483026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249005 27.916±0.00 18.341±0.00 0.286±0.00 2.513±0.00 6.211±5.46 17.376±0.00 14.960±0.00 30.021±0.00 0.455±0.00 37.824±0.00 12.273±0.00 10.178±6.32 25.534±9.09 5.055±2.62
ENST00000381278 4.253±0.00 12.569±0.00 1.177±0.00 0.288±0.21 2.947±0.00 6.447±5.87 N/A 0.038±0.00 1.167±0.00 7.755±0.00 1.415±0.00 4.196±2.35 N/A 2.338±1.42
ENST00000401850 N/A N/A N/A N/A 0.703±0.59 N/A 2.543±1.75 3.818±0.00 0.334±0.00 0.309±0.00 0.627±0.00 1.647±0.00 N/A N/A
ENST00000483026 N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A 1.194±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040L CIL_00040L_0001 CGP 22:42692121-42858106

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001576 IEA globoside biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0006688 NAS glycosphingolipid biosynthetic process
GO:0007009 IDA plasma membrane organization
GO:0008378 IDA galactosyltransferase activity
GO:0015643 IEA toxic substance binding
GO:0016020 IDA membrane
GO:0030173 NAS integral component of Golgi membrane
GO:0050512 IEA lactosylceramide 4-alpha-galactosyltransferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000047878 A4galt alpha 1,4-galactosyltransferase protein_coding Mus_musculus

Loading