C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIB43A domain with coiled-coils 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128408 RIBC2 9606 + 22:45413691-45432496 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000466226 RIBC2-003 45418007-45431016 processed_transcript
  ENST00000614167 RIBC2-001 45413691-45432496 protein_coding
  ENST00000621287 RIBC2-002 45414323-45422506 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000466226ENST00000614167ENST00000621287
Transcript ID Adipose Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000466226 N/A N/A 0.117±0.00 N/A 0.137±0.00 N/A 0.232±0.17 0.518±0.20 N/A 12.058±0.00
ENST00000614167 N/A N/A 0.155±0.00 0.139±0.06 0.175±0.00 0.115±0.00 0.398±0.00 1.768±1.02 0.217±0.01 21.991±4.93
ENST00000621287 0.044±0.00 0.071±0.00 0.133±0.02 0.293±0.00 0.278±0.00 0.478±0.00 0.294±0.00 N/A 0.360±0.10 4.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054C CIL_00054C_0001 CGP 22:45344063-45432496
CIL_00054F CIL_00054F_0001 CGP 22:45413691-45601135

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075177 ribc2 RIB43A domain with coiled-coils 2 protein_coding Danio_rerio
ENSMUSG00000022431 Ribc2 RIB43A domain with coiled-coils 2 protein_coding Mus_musculus

Loading