C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tropomodulin 2 (neuronal)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128872 TMOD2 9606 + 15:51751561-51816368 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249700 TMOD2-001 51751561-51816368 protein_coding
  ENST00000435126 TMOD2-004 51751667-51808881 protein_coding
  ENST00000539962 TMOD2-002 51751597-51810131 protein_coding
  ENST00000560576 TMOD2-003 51751615-51784980 retained_intron
  ENST00000561300 TMOD2-005 51781049-51783136 retained_intron
  ENST00000561407 TMOD2-006 51782822-51810292 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000249700ENST00000435126
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000249700 1.227±0.00 0.452±0.00 27.145±9.63 1.108±0.38 2.415±1.25 0.769±0.52 0.405±0.20 1.719±1.59 3.913±0.00 0.610±0.25 0.310±0.00 1.007±0.42
ENST00000435126 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.753±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IEA tropomyosin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007270 IEA neuron-neuron synaptic transmission
GO:0007399 TAS nervous system development
GO:0007611 IEA learning or memory
GO:0030426 IEA growth cone
GO:0043005 IEA neuron projection
GO:0045745 IEA positive regulation of G-protein coupled receptor protein signaling pathway
GO:0051694 IEA pointed-end actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002571 tmod2 tropomodulin 2 protein_coding Danio_rerio
ENSMUSG00000032186 Tmod2 tropomodulin 2 protein_coding Mus_musculus

Loading