C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tropomodulin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002571 tmod2 7955 + 18:37764299-37826745 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000012164 tmod2-001 37764299-37820158 protein_coding
  ENSDART00000130473 tmod2-201 37780231-37826745 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENSDART00000012164ENSDART00000130473
Transcript ID Heart Liver
ENSDART00000012164 1.063±0.35 0.675±0.00
ENSDART00000130473 0.798±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072B CIL_00072B_0001 CGP 18:37730200-37826745
CIL_0004YJ CIL_0004YJ_0001 CGP 18:37764299-37868245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005523 IEA tropomyosin binding
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000128872 TMOD2 tropomodulin 2 (neuronal) protein_coding Homo_sapiens
ENSG00000138594 TMOD3 tropomodulin 3 (ubiquitous) protein_coding Homo_sapiens
ENSMUSG00000032186 Tmod2 tropomodulin 2 protein_coding Mus_musculus
ENSMUSG00000058587 Tmod3 tropomodulin 3 protein_coding Mus_musculus

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