C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysyl oxidase-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129038 LOXL1 9606 + 15:73925989-73952137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261921 LOXL1-001 73926458-73952137 protein_coding
  ENST00000562548 LOXL1-005 73947216-73952137 retained_intron
  ENST00000566011 LOXL1-002 73925989-73951919 nonsense_mediated_decay
  ENST00000566530 LOXL1-003 73946368-73949575 retained_intron
  ENST00000567675 LOXL1-006 73947828-73952136 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261921ENST00000566530ENST00000567675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261921 6.149±0.00 22.615±0.00 N/A 0.349±0.12 9.656±8.74 1.826±1.05 4.493±4.09 3.338±3.19 1.214±0.98 9.702±0.00 0.724±0.60 7.983±4.49 23.743±3.86 5.459±0.00
ENST00000566530 4.058±0.00 N/A N/A 1.490±0.00 1.559±0.00 2.610±1.61 N/A 5.371±0.00 3.401±0.00 N/A N/A N/A N/A 9.489±0.00
ENST00000567675 N/A N/A 1.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005737 IEA cytoplasm
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0018277 TAS protein deamination
GO:0030198 TAS extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0032496 IEA response to lipopolysaccharide
GO:0035904 IEA aorta development
GO:0055114 TAS:IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054451 loxl1 lysyl oxidase-like 1 protein_coding Danio_rerio
ENSMUSG00000032334 Loxl1 lysyl oxidase-like 1 protein_coding Mus_musculus

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