C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysyl oxidase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261921 LOXL1-001 ENSG00000129038 9606 + 15:73926458-73952137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261921
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261921 6.149±0.00 22.615±0.00 0.349±0.12 9.656±8.74 1.826±1.05 4.493±4.09 3.338±3.19 1.214±0.98 9.702±0.00 0.724±0.60 7.983±4.49 23.743±3.86 5.459±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005737 IEA cytoplasm
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0018277 TAS protein deamination
GO:0030198 TAS extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0032496 IEA response to lipopolysaccharide
GO:0035904 IEA aorta development
GO:0055114 TAS:IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061799 Loxl1-201 protein_coding Mus_musculus 0 1273
ENSDART00000114373 lox-003 protein_coding Danio_rerio 0 250
ENSDART00000016317 lox-002 protein_coding Danio_rerio 0 250
ENSDART00000125407 lox-001 protein_coding Danio_rerio 0 250

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