C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase modifying factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129103 SUMF2 9606 + 7:56064002-56080670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275607 SUMF2-201 56064224-56080669 protein_coding
  ENST00000342190 SUMF2-015 56064255-56080670 protein_coding
  ENST00000395435 SUMF2-010 56064254-56080187 protein_coding
  ENST00000395436 SUMF2-002 56064002-56080124 protein_coding
  ENST00000413756 SUMF2-013 56064289-56079736 protein_coding
  ENST00000413952 SUMF2-003 56064255-56078502 protein_coding
  ENST00000423763 SUMF2-016 56064301-56080638 nonsense_mediated_decay
  ENST00000434526 SUMF2-001 56064224-56080670 protein_coding
  ENST00000436782 SUMF2-006 56064277-56080665 nonsense_mediated_decay
  ENST00000437307 SUMF2-009 56064284-56079832 protein_coding
  ENST00000438133 SUMF2-007 56064308-56080669 nonsense_mediated_decay
  ENST00000447501 SUMF2-008 56064310-56079875 nonsense_mediated_decay
  ENST00000451338 SUMF2-012 56064321-56079567 protein_coding
  ENST00000452216 SUMF2-005 56064265-56079729 nonsense_mediated_decay
  ENST00000461912 SUMF2-014 56076528-56078268 retained_intron
  ENST00000483327 SUMF2-004 56064301-56073956 retained_intron
  ENST00000498777 SUMF2-011 56064305-56074397 retained_intron
  ENST00000529457 SUMF2-017 56064332-56074789 retained_intron
  ENST00000531229 SUMF2-018 56076603-56079747 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275607ENST00000395435ENST00000423763ENST00000434526ENST00000436782ENST00000438133ENST00000451338ENST00000452216ENST00000529457ENST00000531229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275607 N/A 16.907±0.00 N/A 8.960±0.00 28.519±0.00 14.151±0.00 5.557±0.00 N/A N/A N/A 11.486±0.00 N/A 8.944±0.00 11.934±0.00
ENST00000395435 39.631±0.00 27.924±0.00 N/A 24.664±0.00 55.989±0.00 17.224±14.48 4.513±2.84 15.862±12.63 16.830±0.00 21.122±0.00 10.096±0.00 41.370±27.29 31.732±9.78 27.965±9.79
ENST00000423763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.072±0.00 N/A
ENST00000434526 10.301±0.00 N/A 5.806±0.00 2.675±0.00 2.833±0.00 8.203±0.00 1.152±0.00 8.461±2.36 6.605±1.05 5.788±0.00 N/A 17.871±11.94 24.334±8.25 13.559±0.00
ENST00000436782 N/A N/A N/A 8.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438133 N/A N/A N/A 2.456±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451338 N/A N/A N/A N/A N/A 2.976±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452216 30.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 32.890±0.00 N/A N/A N/A N/A
ENST00000529457 N/A N/A N/A N/A N/A 4.107±0.00 N/A N/A N/A N/A N/A 11.075±0.00 N/A N/A
ENST00000531229 N/A N/A 5.136±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MA CIL_0006MA_0001 CGP 7:56051630-56080670
CIL_00072K CIL_00072K_0002 CGP 7:56064002-56092996

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0042803 IEA protein homodimerization activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069497 sumf2 sulfatase modifying factor 2 protein_coding Danio_rerio
ENSMUSG00000025538 Sumf2 sulfatase modifying factor 2 protein_coding Mus_musculus

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