C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfatase modifying factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025538 Sumf2 10090 + 5:129846990-129864050 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000122826 Sumf2-004 129852511-129862798 processed_transcript
  ENSMUST00000128722 Sumf2-001 129852874-129864050 protein_coding
  ENSMUST00000137357 Sumf2-002 129852874-129863432 processed_transcript
  ENSMUST00000153063 Sumf2-003 129852511-129862798 processed_transcript
  ENSMUST00000171300 Sumf2-201 129846990-129863951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000137357ENSMUST00000153063ENSMUST00000171300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000137357 7.377±2.37 N/A 2.958±0.00 4.519±0.00 7.590±0.94 1.829±0.88 3.701±1.14 3.884±2.93 3.678±0.46 9.919±3.22 15.747±9.75 0.697±0.14
ENSMUST00000153063 5.677±1.84 6.561±1.18 N/A N/A 6.033±0.13 4.337±1.41 3.900±0.71 2.030±0.69 2.802±0.33 8.203±1.16 N/A 1.391±0.46
ENSMUST00000171300 4.178±0.27 8.673±2.56 2.881±0.16 N/A 4.789±0.51 3.127±0.56 2.244±1.14 3.599±0.86 2.011±0.74 5.514±1.91 3.248±1.80 0.812±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MA CIL_0006MA_0002 CGP 5:129787439-129864050
CIL_00072K CIL_00072K_0003 CGP 5:129846990-129898549

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069497 sumf2 sulfatase modifying factor 2 protein_coding Danio_rerio
ENSG00000129103 SUMF2 sulfatase modifying factor 2 protein_coding Homo_sapiens

Loading