C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fragile X mental retardation, autosomal homolog 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129245 FXR2 9606 - 17:7591230-7614871 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000250113 FXR2-001 7591230-7614867 protein_coding
  ENST00000571079 FXR2-007 7593579-7594332 retained_intron
  ENST00000571597 FXR2-002 7602968-7614871 protein_coding
  ENST00000573057 FXR2-006 7591442-7592357 processed_transcript
  ENST00000573957 FXR2-004 7594375-7601436 retained_intron
  ENST00000574490 FXR2-005 7594672-7596480 retained_intron
  ENST00000576693 FXR2-003 7602733-7604066 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleTestisENST00000250113
Transcript ID Brain Colon Heart Muscle Testis
ENST00000250113 34.633±16.88 32.534±0.00 34.647±24.32 54.395±39.01 51.746±6.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS:IEA RNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0016020 IDA membrane
GO:0022625 TAS cytosolic large ribosomal subunit
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016260 fxr2 fragile X mental retardation, autosomal homolog 2 protein_coding Danio_rerio
ENSMUSG00000018765 Fxr2 fragile X mental retardation, autosomal homolog 2 protein_coding Mus_musculus

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