C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fragile X mental retardation, autosomal homolog 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000250113 FXR2-001 ENSG00000129245 9606 - 17:7591230-7614867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleTestisENST00000250113
Transcript ID Brain Colon Heart Muscle Testis
ENST00000250113 34.633±16.88 32.534±0.00 34.647±24.32 54.395±39.01 51.746±6.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS:IEA RNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0016020 IDA membrane
GO:0022625 TAS cytosolic large ribosomal subunit
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018909 Fxr2-006 protein_coding Mus_musculus 0 4012
ENSMUST00000139605 Fxr2-002 processed_transcript Mus_musculus 0 617
ENSMUST00000125989 Fxr2-003 processed_transcript Mus_musculus 0 547
ENSMUST00000125586 Fxr2-005 processed_transcript Mus_musculus 0 475
ENSDART00000027718 fxr2-001 protein_coding Danio_rerio 0 438
ENSDART00000143341 fxr2-002 protein_coding Danio_rerio 0 438
ENSDART00000104478 fxr1-001 protein_coding Danio_rerio 0 399
ENSDART00000149482 fxr1-003 protein_coding Danio_rerio 0 398
ENSMUST00000155513 Fxr2-001 processed_transcript Mus_musculus 0 246

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