C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: KRI1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129347 KRI1 9606 - 19:10553078-10566037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312962 KRI1-004 10553078-10566037 protein_coding
  ENST00000432197 KRI1-003 10559810-10566031 protein_coding
  ENST00000478863 KRI1-001 10553576-10565971 retained_intron
  ENST00000536689 KRI1-005 10553085-10565997 retained_intron
  ENST00000536714 KRI1-013 10557558-10559830 retained_intron
  ENST00000537363 KRI1-006 10553091-10559936 retained_intron
  ENST00000537433 KRI1-014 10555131-10559476 retained_intron
  ENST00000537964 KRI1-008 10561003-10566010 processed_transcript
  ENST00000539027 KRI1-012 10557552-10565990 protein_coding
  ENST00000543682 KRI1-010 10560372-10566010 protein_coding
  ENST00000543842 KRI1-015 10555309-10558221 retained_intron
  ENST00000544397 KRI1-009 10561233-10566008 nonsense_mediated_decay
  ENST00000546063 KRI1-011 10560381-10566008 retained_intron
  ENST00000612875 KRI1-002 10553591-10566020 retained_intron
  ENST00000618579 KRI1-016 10553213-10559928 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312962ENST00000432197ENST00000478863ENST00000536689ENST00000536714ENST00000537363ENST00000543682ENST00000612875ENST00000618579
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312962 4.217±0.00 16.979±0.00 0.214±0.00 2.440±0.00 3.885±0.00 5.046±4.76 3.156±0.00 3.480±0.00 1.734±0.00 8.186±0.00 7.723±0.00 9.192±7.33 8.961±0.93 17.740±8.52
ENST00000432197 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.873±0.00 N/A N/A N/A N/A
ENST00000478863 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A 6.457±0.00 N/A N/A
ENST00000536689 N/A N/A 0.093±0.00 0.076±0.00 0.268±0.00 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A
ENST00000536714 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 0.941±0.00 N/A N/A N/A
ENST00000537363 N/A N/A N/A 1.660±1.47 3.053±0.00 0.250±0.00 2.255±2.14 3.948±0.00 1.730±0.00 N/A N/A N/A N/A N/A
ENST00000543682 N/A N/A N/A N/A N/A N/A N/A N/A 1.784±0.00 N/A N/A N/A N/A N/A
ENST00000612875 N/A N/A 0.138±0.00 N/A N/A 0.278±0.00 N/A N/A 1.021±0.01 N/A N/A N/A N/A 33.599±0.00
ENST00000618579 N/A N/A N/A N/A N/A N/A 0.399±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SU CIL_0002SU_0001 CGP 19:10512742-10553418
CIL_000496 CIL_000496_0001 CGP 19:10543895-10566037
CIL_000493 CIL_000493_0001 CGP 19:10553078-10569059

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075380 kri1 KRI1 homolog protein_coding Danio_rerio
ENSMUSG00000035047 Kri1 KRI1 homolog (S. cerevisiae) protein_coding Mus_musculus

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