C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180739-ENSG00000130734 CGP 9606 19:10512742-10553418
GeneTranscriptPositionBiotype
ENSG00000129347 (KRI1)
KRI1 homolog (S. cerevisiae) 		ENST00000312962 (KRI1-004) 10553078-10566037 protein_coding
ENST00000432197 (KRI1-003) 10559810-10566031 protein_coding
ENST00000478863 (KRI1-001) 10553576-10565971 retained_intron
ENST00000536689 (KRI1-005) 10553085-10565997 retained_intron
ENST00000536714 (KRI1-013) 10557558-10559830 retained_intron
ENST00000537363 (KRI1-006) 10553091-10559936 retained_intron
ENST00000537433 (KRI1-014) 10555131-10559476 retained_intron
ENST00000537964 (KRI1-008) 10561003-10566010 processed_transcript
ENST00000539027 (KRI1-012) 10557552-10565990 protein_coding
ENST00000543682 (KRI1-010) 10560372-10566010 protein_coding
ENST00000543842 (KRI1-015) 10555309-10558221 retained_intron
ENST00000544397 (KRI1-009) 10561233-10566008 nonsense_mediated_decay
ENST00000546063 (KRI1-011) 10560381-10566008 retained_intron
ENST00000612875 (KRI1-002) 10553591-10566020 retained_intron
ENST00000618579 (KRI1-016) 10553213-10559928 processed_transcript
ENSG00000180739 (S1PR5)
sphingosine-1-phosphate receptor 5 		ENST00000333430 (S1PR5-001) 10512742-10517450 protein_coding
ENST00000439028 (S1PR5-004) 10512947-10517931 protein_coding
ENST00000590601 (S1PR5-007) 10514852-10517427 protein_coding
ENST00000617721 (S1PR5-201) 10512892-10515021 protein_coding
ENSG00000221410 (MIR1238)
microRNA 1238 		ENST00000408483 (MIR1238-201) 10552122-10552204 miRNA
CIL_0002SU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045087-ENSMUSG00000002820 CGP 10090 9:21242912-21274368
GeneTranscriptPositionBiotype
ENSMUSG00000002820 (Atg4d)
autophagy related 4D, cysteine peptidase 		ENSMUST00000065005 (Atg4d-201) 21265299-21274368 protein_coding
ENSMUSG00000035047 (Kri1)
KRI1 homolog (S. cerevisiae) 		ENSMUST00000038671 (Kri1-001) 21273457-21287969 protein_coding
ENSMUST00000183503 (Kri1-005) 21281995-21287969 retained_intron
ENSMUST00000183665 (Kri1-004) 21287525-21287956 retained_intron
ENSMUST00000183912 (Kri1-002) 21278953-21287969 retained_intron
ENSMUST00000184326 (Kri1-003) 21273636-21287953 protein_coding
ENSMUST00000184410 (Kri1-007) 21273868-21275393 retained_intron
ENSMUST00000184615 (Kri1-006) 21281035-21287956 retained_intron
ENSMUSG00000045087 (S1pr5)
sphingosine-1-phosphate receptor 5 		ENSMUST00000122088 (S1pr5-001) 21242912-21248443 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SU_0001ENSG00000129347ENST00000312962ENST00000432197ENST00000478863ENST00000536689ENST00000536714ENST00000537363ENST00000537433ENST00000537964ENST00000539027ENST00000543682ENST00000543842ENST00000544397ENST00000546063ENST00000612875ENST00000618579ENSG00000180739ENST00000333430ENST00000439028ENST00000590601ENST00000617721ENSG00000221410ENST00000408483CIL_0002SU_0002ENSMUSG00000002820ENSMUST00000065005ENSMUSG00000035047ENSMUST00000038671ENSMUST00000183503ENSMUST00000183665ENSMUST00000183912ENSMUST00000184326ENSMUST00000184410ENSMUST00000184615ENSMUSG00000045087ENSMUST00000122088
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SU_0001ENSG00000129347ENST00000312962ENST00000432197ENST00000478863ENST00000536689ENST00000536714ENST00000537363ENST00000543682ENST00000612875ENST00000618579ENSG00000180739ENST00000333430ENST00000439028ENST00000590601ENST00000617721ENSG00000221410ENST00000408483CIL_0002SU_0002ENSMUSG00000002820ENSMUST00000065005ENSMUSG00000035047ENSMUST00000038671ENSMUST00000184326ENSMUST00000184615ENSMUSG00000045087ENSMUST00000122088
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129347 ENST00000312962 4.217±0.00 16.979±0.00 0.214±0.00 2.440±0.00 3.885±0.00 5.046±4.76 3.156±0.00 3.480±0.00 1.734±0.00 8.186±0.00 7.723±0.00 9.192±7.33 8.961±0.93 17.740±8.52
ENST00000432197 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.873±0.00 N/A N/A N/A N/A
ENST00000478863 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A 6.457±0.00 N/A N/A
ENST00000536689 N/A N/A 0.093±0.00 0.076±0.00 0.268±0.00 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A
ENST00000536714 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 0.941±0.00 N/A N/A N/A
ENST00000537363 N/A N/A N/A 1.660±1.47 3.053±0.00 0.250±0.00 2.255±2.14 3.948±0.00 1.730±0.00 N/A N/A N/A N/A N/A
ENST00000537433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543682 N/A N/A N/A N/A N/A N/A N/A N/A 1.784±0.00 N/A N/A N/A N/A N/A
ENST00000543842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612875 N/A N/A 0.138±0.00 N/A N/A 0.278±0.00 N/A N/A 1.021±0.01 N/A N/A N/A N/A 33.599±0.00
ENST00000618579 N/A N/A N/A N/A N/A N/A 0.399±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000180739 ENST00000333430 N/A 0.675±0.00 N/A 2.452±0.06 N/A N/A N/A 0.100±0.00 0.414±0.36 0.223±0.00 N/A 0.370±0.00 N/A N/A
ENST00000439028 N/A 2.378±0.00 N/A 16.961±0.00 0.885±0.00 N/A N/A N/A 0.245±0.00 4.098±0.00 0.011±0.00 0.331±0.12 1.586±0.42 0.659±0.00
ENST00000590601 N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A N/A N/A
ENST00000617721 0.248±0.00 N/A 0.189±0.00 N/A N/A N/A N/A 0.255±0.00 N/A N/A 0.340±0.00 1.187±0.73 2.316±1.48 0.816±0.00
ENSG00000221410 ENST00000408483 N/A 0.473±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.348±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002820 ENSMUST00000065005 7.122±2.32 9.560±2.30 5.116±1.96 6.771±4.47 7.979±3.79 29.175±7.27 6.436±1.34 17.671±2.34 15.834±7.26 7.976±4.07 8.428±2.69 9.245±3.25 17.321±2.81 8.376±2.11
ENSMUSG00000035047 ENSMUST00000038671 7.139±2.11 7.310±0.43 9.783±0.25 14.790±6.25 4.610±1.44 9.171±0.51 4.939±1.10 6.643±1.48 8.300±4.44 7.933±0.13 4.286±0.29 11.142±8.67 19.419±11.54 9.016±5.86
ENSMUST00000183503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.718±5.43
ENSMUST00000184410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184615 N/A N/A N/A 17.784±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 27.340±0.00 28.571±0.00
ENSMUSG00000045087 ENSMUST00000122088 0.481±0.26 0.454±0.07 0.223±0.04 4.042±3.35 0.921±0.44 0.076±0.04 0.441±0.32 0.199±0.05 1.472±1.58 3.943±0.48 0.036±0.02 0.192±0.12 0.033±0.01 0.114±0.03

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