C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ajuba LIM protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129474 AJUBA 9606 - 14:22971174-22982642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262713 AJUBA-001 22971174-22982642 protein_coding
  ENST00000361265 AJUBA-201 22971819-22982338 protein_coding
  ENST00000397388 AJUBA-002 22971815-22977223 protein_coding
  ENST00000553592 AJUBA-008 22974047-22976843 protein_coding
  ENST00000553736 AJUBA-004 22978612-22981586 protein_coding
  ENST00000553911 AJUBA-006 22974093-22976804 protein_coding
  ENST00000555479 AJUBA-007 22974655-22975295 retained_intron
  ENST00000556731 AJUBA-005 22974047-22977737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000262713ENST00000361265ENST00000397388
Transcript ID Adipose Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000262713 1.296±0.00 0.954±0.00 4.303±0.00 1.894±0.00 4.106±0.00 2.911±0.00 1.553±0.00 4.503±2.53 6.306±1.72 3.899±0.08
ENST00000361265 N/A N/A N/A N/A N/A N/A N/A N/A 4.348±1.35 N/A
ENST00000397388 N/A 1.263±0.00 N/A N/A 2.595±1.42 1.641±0.80 N/A 5.262±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZP CIL_0001ZP_0001 CGP 14:22946270-22982642
CIL_0002ZR CIL_0002ZR_0001 CGP 14:22971174-23010166

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000278 TAS mitotic cell cycle
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001666 IDA response to hypoxia
GO:0003682 IEA chromatin binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005925 IEA focal adhesion
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016339 IEA calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030027 IEA lamellipodium
GO:0030032 IEA lamellipodium assembly
GO:0030334 IEA regulation of cell migration
GO:0031328 IEA positive regulation of cellular biosynthetic process
GO:0031334 IDA positive regulation of protein complex assembly
GO:0033673 IEA negative regulation of kinase activity
GO:0033674 IEA positive regulation of kinase activity
GO:0034613 IEA cellular protein localization
GO:0035195 IMP gene silencing by miRNA
GO:0035313 IEA wound healing, spreading of epidermal cells
GO:0035331 IDA negative regulation of hippo signaling
GO:0043087 IEA regulation of GTPase activity
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043406 IEA positive regulation of MAP kinase activity
GO:0045294 IDA alpha-catenin binding
GO:0046474 IEA glycerophospholipid biosynthetic process
GO:0048041 IEA focal adhesion assembly
GO:0051015 IEA actin filament binding
GO:1900037 IDA regulation of cellular response to hypoxia
GO:2000637 IMP positive regulation of gene silencing by miRNA

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077842 ajuba ajuba LIM protein protein_coding Danio_rerio
ENSMUSG00000022178 Ajuba ajuba LIM protein protein_coding Mus_musculus

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