C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ajuba LIM protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397388 AJUBA-002 ENSG00000129474 9606 - 14:22971815-22977223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverOvaryENST00000397388
Transcript ID Bladder Kidney Liver Ovary
ENST00000397388 1.263±0.00 2.595±1.42 1.641±0.80 5.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZP CIL_0001ZP_0001 CGP 14:22946270-22982642
CIL_0002ZR CIL_0002ZR_0001 CGP 14:22971174-23010166

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001666 IDA response to hypoxia
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0031334 IDA positive regulation of protein complex assembly
GO:0035195 IMP gene silencing by miRNA
GO:0035331 IDA negative regulation of hippo signaling
GO:0045294 IDA alpha-catenin binding
GO:1900037 IDA regulation of cellular response to hypoxia
GO:2000637 IMP positive regulation of gene silencing by miRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054487 Ajuba-201 protein_coding Mus_musculus 0 684

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