C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130182 ZSCAN10 9606 - 16:3088890-3099317 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252463 ZSCAN10-001 3088890-3092860 protein_coding
  ENST00000538082 ZSCAN10-004 3088989-3099295 protein_coding
  ENST00000571903 ZSCAN10-002 3090232-3093236 retained_intron
  ENST00000572431 ZSCAN10-009 3090234-3099228 protein_coding
  ENST00000572548 ZSCAN10-008 3090552-3099261 protein_coding
  ENST00000573931 ZSCAN10-010 3096450-3099292 processed_transcript
  ENST00000575108 ZSCAN10-003 3088894-3099292 protein_coding
  ENST00000576483 ZSCAN10-006 3092229-3099294 protein_coding
  ENST00000576985 ZSCAN10-005 3090232-3099317 protein_coding
  ENST00000577059 ZSCAN10-007 3092451-3099270 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainLiverLungMuscleOvaryPlacentaTestisENST00000538082ENST00000571903ENST00000572431ENST00000572548ENST00000575108ENST00000576483
Transcript ID Adipose Adrenal Brain Liver Lung Muscle Ovary Placenta Testis
ENST00000538082 N/A 0.019±0.00 0.130±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571903 N/A 0.016±0.00 0.027±0.00 N/A N/A N/A N/A N/A N/A
ENST00000572431 N/A N/A 0.122±0.00 N/A N/A N/A N/A N/A N/A
ENST00000572548 N/A N/A N/A N/A N/A 0.579±0.00 N/A N/A N/A
ENST00000575108 N/A N/A N/A N/A N/A N/A 0.108±0.00 0.062±0.02 N/A
ENST00000576483 0.153±0.00 0.127±0.00 0.054±0.00 0.042±0.00 0.140±0.00 N/A N/A N/A 0.137±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA:ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISS:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0043565 ISS sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000023902 Zscan10 zinc finger and SCAN domain containing 10 protein_coding Mus_musculus

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