C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023902 Zscan10 10090 + 17:23600856-23611019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095595 Zscan10-001 23600856-23611012 protein_coding
  ENSMUST00000115509 Zscan10-003 23600856-23611012 protein_coding
  ENSMUST00000117606 Zscan10-007 23605505-23609697 protein_coding
  ENSMUST00000118369 Zscan10-006 23605514-23609698 protein_coding
  ENSMUST00000120967 Zscan10-002 23600856-23611019 protein_coding
  ENSMUST00000122285 Zscan10-010 23605514-23609697 nonsense_mediated_decay
  ENSMUST00000123866 Zscan10-004 23600941-23609701 protein_coding
  ENSMUST00000125912 Zscan10-012 23605481-23607170 retained_intron
  ENSMUST00000129227 Zscan10-008 23600862-23610822 protein_coding
  ENSMUST00000133749 Zscan10-011 23607490-23609697 retained_intron
  ENSMUST00000138487 Zscan10-009 23605515-23609698 protein_coding
  ENSMUST00000148062 Zscan10-005 23600862-23610822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095595ENSMUST00000115509ENSMUST00000117606ENSMUST00000120967ENSMUST00000125912ENSMUST00000129227ENSMUST00000133749ENSMUST00000138487ENSMUST00000148062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095595 N/A N/A 0.020±0.00 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.614±0.50 0.422±0.15
ENSMUST00000115509 0.023±0.00 N/A 0.017±0.00 0.022±0.00 0.073±0.05 0.055±0.00 0.010±0.00 N/A 0.012±0.00 0.013±0.00 N/A 0.046±0.02 0.079±0.00 0.932±0.08
ENSMUST00000117606 0.055±0.03 N/A N/A N/A N/A 0.067±0.00 N/A 0.042±0.00 N/A N/A 0.066±0.00 N/A 0.286±0.00 N/A
ENSMUST00000120967 N/A 0.022±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.166±0.00 0.701±0.10
ENSMUST00000125912 N/A N/A N/A 0.169±0.00 N/A N/A N/A 0.080±0.00 0.015±0.00 N/A N/A 0.280±0.00 0.319±0.00 3.019±0.00
ENSMUST00000129227 0.036±0.00 0.022±0.00 N/A 0.017±0.00 0.082±0.06 0.045±0.00 N/A 0.026±0.00 0.008±0.00 0.020±0.01 N/A 0.096±0.05 0.055±0.00 N/A
ENSMUST00000133749 N/A N/A N/A N/A 0.188±0.05 N/A N/A N/A 0.015±0.00 N/A N/A 0.094±0.04 0.911±0.00 2.083±0.00
ENSMUST00000138487 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A
ENSMUST00000148062 N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.203±0.00 0.690±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048863 TAS stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130182 ZSCAN10 zinc finger and SCAN domain containing 10 protein_coding Homo_sapiens

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