C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, aminophospholipid transporter, class I, type 8B, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130270 ATP8B3 9606 - 19:1782075-1812276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310127 ATP8B3-002 1782075-1812276 protein_coding
  ENST00000525591 ATP8B3-005 1783028-1812200 protein_coding
  ENST00000526092 ATP8B3-001 1798761-1812276 protein_coding
  ENST00000526847 ATP8B3-008 1785558-1790817 nonsense_mediated_decay
  ENST00000531925 ATP8B3-003 1782077-1812276 nonsense_mediated_decay
  ENST00000533107 ATP8B3-007 1798764-1806160 retained_intron
  ENST00000533993 ATP8B3-004 1805190-1811624 protein_coding
  ENST00000587160 ATP8B3-009 1807168-1812237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310127ENST00000525591ENST00000526092ENST00000526847ENST00000531925ENST00000533107ENST00000533993
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310127 N/A N/A 0.030±0.00 N/A 0.038±0.00 N/A 0.079±0.00 N/A N/A 0.016±0.00 0.208±0.00 0.056±0.00 9.497±7.16
ENST00000525591 N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526092 N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A
ENST00000526847 N/A N/A 0.476±0.00 N/A N/A 0.162±0.00 N/A N/A N/A N/A 0.936±0.00 N/A N/A
ENST00000531925 0.066±0.00 N/A N/A 0.018±0.00 0.022±0.00 N/A N/A N/A N/A N/A N/A 0.165±0.00 1.452±0.00
ENST00000533107 0.607±0.00 0.464±0.00 0.342±0.00 0.827±0.00 0.304±0.16 0.185±0.00 0.446±0.00 0.280±0.00 0.415±0.38 0.063±0.00 0.395±0.09 0.125±0.06 N/A
ENST00000533993 0.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.148±0.00 0.111±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZE CIL_0005ZE_0002 CGP 19:1752373-1812276
CIL_000187 CIL_000187_0001 CGP 19:1782075-1848463

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0001669 IEA acrosomal vesicle
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005783 IEA endoplasmic reticulum
GO:0007339 IEA binding of sperm to zona pellucida
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042285 atp8b3 ATPase, aminophospholipid transporter, class I, type 8B, member 3 protein_coding Danio_rerio
ENSMUSG00000003341 Atp8b3 ATPase, class I, type 8B, member 3 protein_coding Mus_musculus

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