C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FCH domain only 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130475 FCHO1 9606 + 19:17747718-17788568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252771 FCHO1-201 17747718-17788568 protein_coding
  ENST00000593385 FCHO1-011 17747759-17762780 protein_coding
  ENST00000593833 FCHO1-013 17747762-17770856 protein_coding
  ENST00000593870 FCHO1-017 17751481-17762840 protein_coding
  ENST00000594068 FCHO1-021 17751503-17770554 protein_coding
  ENST00000594202 FCHO1-002 17747718-17788557 protein_coding
  ENST00000595023 FCHO1-020 17751499-17774241 protein_coding
  ENST00000595033 FCHO1-003 17751506-17788453 protein_coding
  ENST00000595549 FCHO1-028 17755098-17772697 protein_coding
  ENST00000595594 FCHO1-035 17778473-17784235 retained_intron
  ENST00000595749 FCHO1-025 17754212-17754898 processed_transcript
  ENST00000596309 FCHO1-008 17747753-17766751 protein_coding
  ENST00000596462 FCHO1-024 17754210-17762780 protein_coding
  ENST00000596507 FCHO1-022 17751506-17772517 protein_coding
  ENST00000596522 FCHO1-031 17774667-17776043 retained_intron
  ENST00000596536 FCHO1-004 17751477-17788557 protein_coding
  ENST00000596865 FCHO1-026 17754212-17766766 protein_coding
  ENST00000596951 FCHO1-005 17754676-17788562 protein_coding
  ENST00000597076 FCHO1-029 17770423-17774589 retained_intron
  ENST00000597474 FCHO1-010 17747756-17770463 protein_coding
  ENST00000597512 FCHO1-006 17762703-17788538 protein_coding
  ENST00000597718 FCHO1-023 17751536-17770896 protein_coding
  ENST00000598067 FCHO1-014 17747762-17762819 protein_coding
  ENST00000598086 FCHO1-018 17751481-17766809 protein_coding
  ENST00000598539 FCHO1-009 17747756-17764383 protein_coding
  ENST00000598932 FCHO1-019 17751489-17766778 protein_coding
  ENST00000598960 FCHO1-027 17754218-17762805 protein_coding
  ENST00000599236 FCHO1-015 17747762-17766622 processed_transcript
  ENST00000599766 FCHO1-032 17776157-17781722 retained_intron
  ENST00000600058 FCHO1-034 17778441-17783172 retained_intron
  ENST00000600201 FCHO1-012 17747761-17755622 retained_intron
  ENST00000600209 FCHO1-007 17747746-17770827 protein_coding
  ENST00000600393 FCHO1-030 17770843-17774695 retained_intron
  ENST00000600676 FCHO1-001 17747745-17788568 protein_coding
  ENST00000601247 FCHO1-016 17747768-17766695 processed_transcript
  ENST00000602111 FCHO1-033 17776626-17783058 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252771ENST00000593385ENST00000593833ENST00000593870ENST00000594068ENST00000594202ENST00000595023ENST00000595033ENST00000595549ENST00000595594ENST00000596507ENST00000596951ENST00000597076ENST00000597474ENST00000597512ENST00000598067ENST00000598932ENST00000598960ENST00000600058ENST00000600201ENST00000600393ENST00000600676
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.083±0.00 N/A N/A
ENST00000593385 N/A N/A N/A N/A N/A N/A 0.138±0.00 0.241±0.00 N/A N/A N/A N/A N/A N/A
ENST00000593833 N/A N/A N/A N/A 0.985±0.00 N/A N/A 0.723±0.00 N/A N/A N/A N/A 0.402±0.00 N/A
ENST00000593870 N/A N/A 0.708±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594068 N/A N/A N/A N/A N/A N/A 0.292±0.00 N/A N/A N/A 0.315±0.00 N/A N/A N/A
ENST00000594202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A
ENST00000595023 N/A N/A N/A 1.006±0.00 N/A N/A 0.025±0.00 N/A N/A 0.804±0.00 N/A N/A N/A N/A
ENST00000595033 N/A N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A 0.587±0.00 0.050±0.00 0.383±0.00 N/A N/A
ENST00000595549 N/A N/A N/A N/A N/A 1.182±0.00 N/A N/A 0.449±0.00 N/A N/A 1.197±0.00 N/A 2.638±0.00
ENST00000595594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A
ENST00000596507 N/A N/A N/A 1.831±0.00 0.296±0.00 N/A N/A N/A N/A 0.664±0.00 N/A 0.361±0.00 N/A N/A
ENST00000596951 N/A 3.089±0.00 N/A 2.692±0.00 N/A N/A N/A N/A N/A 0.781±0.00 N/A 1.505±0.00 N/A N/A
ENST00000597076 0.524±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.00 N/A N/A
ENST00000597512 N/A N/A N/A 1.722±1.27 0.315±0.00 N/A 0.040±0.00 N/A N/A N/A N/A N/A 0.514±0.00 1.199±0.00
ENST00000598067 0.368±0.00 N/A N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A 0.153±0.00 N/A N/A N/A
ENST00000598932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A
ENST00000598960 N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A
ENST00000600058 0.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600201 N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A N/A N/A N/A N/A
ENST00000600393 N/A N/A N/A N/A N/A N/A N/A N/A 0.592±0.00 N/A N/A N/A N/A N/A
ENST00000600676 N/A 2.799±0.00 N/A 3.813±0.00 N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0030136 IDA clathrin-coated vesicle
GO:0035612 IDA AP-2 adaptor complex binding
GO:0048268 IMP clathrin coat assembly
GO:0072583 IMP clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015356 FCHO1 FCH domain only 1 protein_coding Danio_rerio
ENSMUSG00000070000 Fcho1 FCH domain only 1 protein_coding Mus_musculus

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