C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crumbs family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130545 CRB3 9606 + 19:6463777-6467221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308243 CRB3-004 6464531-6466769 protein_coding
  ENST00000356762 CRB3-001 6464283-6467221 protein_coding
  ENST00000598494 CRB3-003 6463777-6467221 protein_coding
  ENST00000600229 CRB3-002 6464279-6467221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverLungOvaryPlacentaENST00000308243ENST00000356762ENST00000600229
Transcript ID Bladder Colon Kidney Liver Lung Ovary Placenta
ENST00000308243 N/A N/A N/A N/A 2.088±0.00 N/A N/A
ENST00000356762 N/A N/A N/A 12.618±0.00 N/A 1.882±0.00 N/A
ENST00000600229 1.135±0.00 2.045±0.00 8.794±5.94 N/A 11.879±0.00 5.367±3.18 7.670±3.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CX CIL_0004CX_0001 CGP 19:6426037-6465203
CIL_0004CR CIL_0004CR_0001 CGP 19:6436079-6467221
CIL_0002QU CIL_0002QU_0001 CGP 19:6463777-6482557

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005923 IEA tight junction
GO:0016021 IEA integral component of membrane
GO:0017124 IPI SH3 domain binding
GO:0019904 IPI protein domain specific binding
GO:0030054 IDA cell junction
GO:0034329 TAS cell junction assembly
GO:0043234 IEA protein complex
GO:0045177 IEA apical part of cell
GO:0045216 TAS cell-cell junction organization
GO:0070062 IDA extracellular vesicular exosome
GO:0070830 TAS tight junction assembly
GO:0072659 IDA protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044279 Crb3 crumbs homolog 3 (Drosophila) protein_coding Mus_musculus

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