C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crumbs homolog 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044279 Crb3 10090 + 17:57059105-57065918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071826 Crb3-001 57059105-57065912 protein_coding
  ENSMUST00000097299 Crb3-002 57062231-57065918 protein_coding
  ENSMUST00000163628 Crb3-005 57062508-57065164 protein_coding
  ENSMUST00000163763 Crb3-004 57062299-57065427 protein_coding
  ENSMUST00000169543 Crb3-003 57062283-57065917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071826ENSMUST00000097299ENSMUST00000163628ENSMUST00000163763ENSMUST00000169543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071826 0.039±0.00 0.085±0.04 N/A 0.192±0.03 1.096±0.50 N/A 0.121±0.01 4.583±0.00 1.879±0.98 N/A N/A 1.207±0.04 3.226±0.00 0.546±0.17
ENSMUST00000097299 3.500±0.74 0.112±0.08 6.061±0.87 0.193±0.09 2.060±0.41 55.139±13.00 0.089±0.02 24.006±1.48 7.401±3.28 14.501±1.67 N/A 4.611±2.10 18.964±10.72 0.351±0.00
ENSMUST00000163628 N/A 0.316±0.00 N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163763 0.884±0.88 0.231±0.13 2.956±1.04 0.262±0.05 1.108±0.04 31.838±3.82 N/A 8.335±0.43 2.764±1.43 5.772±0.85 N/A 1.515±0.11 6.213±1.06 0.300±0.06
ENSMUST00000169543 0.909±0.88 0.164±0.12 5.496±1.55 0.242±0.06 2.647±0.96 20.786±4.97 0.302±0.12 12.707±2.00 4.232±1.84 13.229±3.26 0.178±0.04 3.112±1.27 11.650±8.05 0.646±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CX CIL_0004CX_0002 CGP 17:57032773-57059863
CIL_0004CR CIL_0004CR_0002 CGP 17:57043711-57065918
CIL_0002QU CIL_0002QU_0002 CGP 17:57059105-57078510

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005923 IEA tight junction
GO:0016021 IEA integral component of membrane
GO:0016324 ISA apical plasma membrane
GO:0017124 IEA SH3 domain binding
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0043234 IEA protein complex
GO:0045177 IDA apical part of cell
GO:0045198 ISA establishment of epithelial cell apical/basal polarity
GO:0045216 ISA cell-cell junction organization
GO:0070062 IEA extracellular vesicular exosome
GO:0072659 IEA protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130545 CRB3 crumbs family member 3 protein_coding Homo_sapiens

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