C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, gamma complex associated protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130640 TUBGCP2 9606 - 10:133278630-133312337 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252936 TUBGCP2-001 133278630-133302981 protein_coding
  ENST00000368562 TUBGCP2-003 133279641-133291034 protein_coding
  ENST00000368563 TUBGCP2-201 133278630-133309156 protein_coding
  ENST00000417178 TUBGCP2-202 133278630-133309156 protein_coding
  ENST00000470829 TUBGCP2-007 133299435-133309134 processed_transcript
  ENST00000477923 TUBGCP2-004 133279640-133281522 processed_transcript
  ENST00000480198 TUBGCP2-008 133301701-133308848 retained_intron
  ENST00000482278 TUBGCP2-002 133279642-133312337 nonsense_mediated_decay
  ENST00000487796 TUBGCP2-006 133297987-133308860 nonsense_mediated_decay
  ENST00000543663 TUBGCP2-203 133278630-133309156 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252936ENST00000368562ENST00000368563ENST00000417178ENST00000482278
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252936 1.524±0.00 9.483±5.58 3.115±0.35 10.339±0.00 2.121±1.12 6.281±1.79 4.347±0.04 4.896±0.00 8.507±6.92 9.640±5.47 4.116±1.38 16.205±0.00
ENST00000368562 N/A N/A N/A N/A N/A N/A N/A 1.300±0.00 0.726±0.00 N/A N/A N/A
ENST00000368563 2.212±0.00 1.491±0.00 N/A N/A 2.056±1.25 8.790±0.00 N/A 4.333±2.67 4.130±0.00 3.184±0.00 N/A 6.297±0.00
ENST00000417178 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.958±0.00 N/A N/A
ENST00000482278 N/A N/A N/A N/A 2.197±0.00 N/A N/A N/A N/A N/A N/A 7.824±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000479 CIL_000479_0002 CGP 10:133262403-133312337
CIL_0000B9 CIL_0000B9_0001 CGP 10:133278630-133313162

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000278 TAS mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005815 IEA:TAS microtubule organizing center
GO:0005829 TAS cytosol
GO:0005881 TAS cytoplasmic microtubule
GO:0006461 TAS protein complex assembly
GO:0007020 TAS microtubule nucleation
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013079 tubgcp2 tubulin, gamma complex associated protein 2 protein_coding Danio_rerio
ENSMUSG00000025474 Tubgcp2 tubulin, gamma complex associated protein 2 protein_coding Mus_musculus

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