C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA binding protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130700 GATA5 9606 - 20:62463497-62475970 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252997 GATA5-001 62463497-62475970 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000252997
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000252997 0.021±0.00 0.243±0.00 0.012±0.00 0.066±0.04 0.485±0.24 1.377±0.00 0.289±0.03 0.933±0.24 1.126±0.71 0.637±0.20 5.701±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DW CIL_0001DW_0001 CGP 20:62410237-62475970

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001158 IEA enhancer sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007596 TAS blood coagulation
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060575 IDA intestinal epithelial cell differentiation
GO:0071773 IEA cellular response to BMP stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017821 gata5 GATA-binding protein 5 protein_coding Danio_rerio
ENSMUSG00000015627 Gata5 GATA binding protein 5 protein_coding Mus_musculus

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