C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA binding protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015627 Gata5 10090 - 2:180325133-180334699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015771 Gata5-001 180325133-180334699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015771
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015771 0.496±0.25 0.097±0.04 10.030±1.45 0.008±0.01 0.380±0.07 0.371±0.05 0.380±0.08 0.115±0.09 2.321±0.82 0.020±0.00 0.392±0.17 0.171±0.12 0.042±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DW CIL_0001DW_0002 CGP 2:180277646-180334699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001158 IDA enhancer sequence-specific DNA binding
GO:0003677 IDA DNA binding
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 ISO positive regulation of transcription from RNA polymerase II promoter
GO:0060575 ISO intestinal epithelial cell differentiation
GO:0071773 IDA cellular response to BMP stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017821 gata5 GATA-binding protein 5 protein_coding Danio_rerio
ENSG00000130700 GATA5 GATA binding protein 5 protein_coding Homo_sapiens

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