C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130876 SLC7A10 9606 - 19:33208664-33225850 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253188 SLC7A10-001 33208664-33225850 protein_coding
  ENST00000587064 SLC7A10-003 33211427-33225798 nonsense_mediated_decay
  ENST00000590036 SLC7A10-005 33208820-33225798 nonsense_mediated_decay
  ENST00000590490 SLC7A10-004 33208776-33211689 retained_intron
  ENST00000592596 SLC7A10-002 33211539-33225798 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartENST00000253188ENST00000590036
Transcript ID Adipose Brain Breast Heart
ENST00000253188 4.096±0.00 4.548±0.00 6.607±6.43 0.369±0.00
ENST00000590036 7.637±0.00 N/A 22.187±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NJ CIL_0004NJ_0002 CGP 19:33177603-33225850

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0007596 TAS blood coagulation
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015175 IDA neutral amino acid transmembrane transporter activity
GO:0015194 TAS L-serine transmembrane transporter activity
GO:0015804 IDA neutral amino acid transport
GO:0015825 TAS L-serine transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042941 IEA D-alanine transport
GO:0042942 IEA D-serine transport
GO:0050900 TAS leukocyte migration
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008100 slc7a10a solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a protein_coding Danio_rerio
ENSDARG00000051730 slc7a10b solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b protein_coding Danio_rerio
ENSMUSG00000030495 Slc7a10 solute carrier family 7 (cationic amino acid transporter, y+ system), member 10 protein_coding Mus_musculus

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