C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004NJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008485-ENSDARG00000008100 CGP 7955 7:39670962-39732776
GeneTranscriptPositionBiotype
ENSDARG00000008100 (slc7a10a)
solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a 		ENSDART00000075782 (slc7a10a-001) 39707751-39732776 protein_coding
ENSDARG00000008485 (LRP3)
low density lipoprotein receptor-related protein 3 		ENSDART00000016265 (LRP3-201) 39670962-39700514 protein_coding
CIL_0004NJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130881-ENSG00000130876 CGP 9606 19:33177603-33225850
GeneTranscriptPositionBiotype
ENSG00000130876 (SLC7A10)
solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 		ENST00000253188 (SLC7A10-001) 33208664-33225850 protein_coding
ENST00000587064 (SLC7A10-003) 33211427-33225798 nonsense_mediated_decay
ENST00000590036 (SLC7A10-005) 33208820-33225798 nonsense_mediated_decay
ENST00000590490 (SLC7A10-004) 33208776-33211689 retained_intron
ENST00000592596 (SLC7A10-002) 33211539-33225798 nonsense_mediated_decay
ENSG00000130881 (LRP3)
low density lipoprotein receptor-related protein 3 		ENST00000253193 (LRP3-001) 33194584-33208867 protein_coding
ENST00000590275 (LRP3-002) 33196736-33205534 retained_intron
ENST00000590278 (LRP3-003) 33203870-33207639 retained_intron
ENST00000592484 (LRP3-005) 33177603-33205291 protein_coding
ENSG00000267054 (CTD-2540B15.10)
 ENST00000590117 (CTD-2540B15.10-001) 33178056-33178651 sense_intronic
ENSG00000267714 (CTD-2540B15.6)
 ENST00000590492 (CTD-2540B15.6-001) 33217817-33221170 antisense
ENSG00000273420 (CTD-2540B15.13)
 ENST00000609744 (CTD-2540B15.13-001) 33207129-33207639 3prime_overlapping_ncrna

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NJ_0001ENSDARG00000008100ENSDART00000075782ENSDARG00000008485ENSDART00000016265CIL_0004NJ_0002ENSG00000130876ENST00000253188ENST00000587064ENST00000590036ENST00000590490ENST00000592596ENSG00000130881ENST00000253193ENST00000590275ENST00000590278ENST00000592484ENSG00000267054ENST00000590117ENSG00000267714ENST00000590492ENSG00000273420ENST00000609744
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NJ_0001ENSDARG00000008100ENSDART00000075782ENSDARG00000008485ENSDART00000016265CIL_0004NJ_0002ENSG00000130876ENST00000253188ENST00000590036ENSG00000130881ENST00000253193ENST00000590275ENST00000590278ENST00000592484ENSG00000267054ENST00000590117ENSG00000267714ENST00000590492ENSG00000273420ENST00000609744
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008100 ENSDART00000075782 N/A N/A N/A 12.413±4.73 N/A N/A 7.121±4.99 5.706±0.42 0.089±0.00 N/A 6.378±0.00 N/A N/A N/A
ENSDARG00000008485 ENSDART00000016265 N/A N/A N/A N/A N/A N/A 0.692±0.22 0.234±0.00 0.012±0.00 N/A 0.375±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130876 ENST00000253188 4.096±0.00 N/A N/A 4.548±0.00 6.607±6.43 N/A 0.369±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000587064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590036 7.637±0.00 N/A N/A N/A 22.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130881 ENST00000253193 7.332±0.00 8.009±0.00 N/A 10.373±6.00 22.594±0.00 5.013±4.89 3.402±2.85 3.616±1.84 5.921±4.88 1.224±1.11 3.160±1.08 15.208±13.65 4.889±0.89 6.256±4.11
ENST00000590275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.169±0.00
ENST00000590278 3.108±0.00 N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 N/A N/A 7.217±0.00 0.795±0.00 1.009±0.00
ENST00000592484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.499±0.00 N/A
ENSG00000267054 ENST00000590117 0.334±0.00 0.812±0.00 N/A 0.318±0.14 0.080±0.00 0.144±0.00 0.112±0.00 0.080±0.00 N/A 0.238±0.00 N/A N/A 0.168±0.00 0.271±0.00
ENSG00000267714 ENST00000590492 0.513±0.00 0.083±0.00 N/A 0.892±0.00 0.285±0.00 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000273420 ENST00000609744 N/A 17.922±0.00 0.267±0.00 8.714±0.00 N/A 7.425±6.94 N/A 7.797±0.00 28.965±0.00 7.927±0.00 N/A 30.990±34.65 9.745±1.36 37.255±0.00

Loading