C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 12 open reading frame 65
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130921 C12orf65 9606 + 12:123232916-123257959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253233 C12orf65-001 123232916-123257959 protein_coding
  ENST00000366329 C12orf65-201 123233481-123257959 protein_coding
  ENST00000425637 C12orf65-002 123233437-123256962 retained_intron
  ENST00000429587 C12orf65-007 123253390-123257571 protein_coding
  ENST00000536130 C12orf65-005 123233458-123253783 protein_coding
  ENST00000538888 C12orf65-008 123233437-123256891 retained_intron
  ENST00000543139 C12orf65-003 123248278-123256945 protein_coding
  ENST00000546132 C12orf65-006 123233462-123253964 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253233ENST00000366329ENST00000429587ENST00000543139
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253233 N/A N/A 2.447±1.16 N/A 2.800±0.00 N/A 3.487±0.00 2.273±0.00 N/A 2.337±0.00 9.541±0.00 3.620±0.34 6.646±0.00
ENST00000366329 1.894±0.00 5.428±0.00 4.241±0.00 2.949±0.00 2.598±0.00 2.704±0.00 4.401±0.00 2.647±0.00 5.790±0.00 N/A 3.933±0.00 1.530±0.00 N/A
ENST00000429587 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.545±0.00 N/A 3.932±0.00 N/A
ENST00000543139 N/A 3.950±0.00 N/A 1.921±0.32 1.566±0.00 1.163±0.00 2.605±0.00 N/A 1.424±0.00 N/A 4.876±3.31 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0003J5 CIL_0003J5_0001 CGP 12:122983480-123244014
CIL_0003J4 CIL_0003J4_0001 CGP 12:123152320-123257959
CIL_0003J7 CIL_0003J7_0001 CGP 12:123232916-123272334

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003747 IEA translation release factor activity
GO:0005739 NAS mitochondrion
GO:0006415 IEA translational termination
GO:0008219 IEA cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059447 C5H12orf65 (1 of 2) chromosome 12 open reading frame 65 protein_coding Danio_rerio
ENSDARG00000097803 C5H12orf65 (2 of 2) chromosome 12 open reading frame 65 protein_coding Danio_rerio
ENSMUSG00000047635 2810006K23Rik RIKEN cDNA 2810006K23 gene protein_coding Mus_musculus

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