C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA directed) nu
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130997 POLN 9606 - 4:2071918-2242121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000382865 POLN-201 2071918-2229231 protein_coding
  ENST00000503371 POLN-005 2071922-2077058 processed_transcript
  ENST00000503601 POLN-010 2081396-2090305 retained_intron
  ENST00000506518 POLN-007 2208327-2232143 processed_transcript
  ENST00000508568 POLN-006 2081110-2083010 processed_transcript
  ENST00000509623 POLN-013 2078485-2081041 processed_transcript
  ENST00000510344 POLN-008 2156497-2159211 retained_intron
  ENST00000511098 POLN-004 2071950-2179387 protein_coding
  ENST00000511777 POLN-014 2071960-2081053 retained_intron
  ENST00000511885 POLN-001 2071918-2242121 protein_coding
  ENST00000514521 POLN-012 2071960-2076447 processed_transcript
  ENST00000514858 POLN-002 2078492-2208111 retained_intron
  ENST00000515357 POLN-003 2156394-2242121 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyMuscleTestisENST00000382865ENST00000511098ENST00000511885ENST00000515357
Transcript ID Brain Colon Heart Kidney Muscle Testis
ENST00000382865 1.443±0.00 N/A 0.183±0.00 N/A N/A N/A
ENST00000511098 N/A N/A N/A 0.879±0.00 0.664±0.00 N/A
ENST00000511885 N/A N/A N/A N/A N/A 2.035±0.00
ENST00000515357 N/A 0.324±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VA CIL_0006VA_0001 CGP 4:2059512-2242121
CIL_0006VB CIL_0006VB_0001 CGP 4:2071918-2242164

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003887 IDA:IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006261 IEA DNA-dependent DNA replication
GO:0019985 IMP translesion synthesis
GO:0030332 IPI cyclin binding
GO:0036297 IMP interstrand cross-link repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086678 polymerase (DNA directed) nu protein_coding Danio_rerio
ENSMUSG00000045102 Poln DNA polymerase N protein_coding Mus_musculus

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