C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185818-ENSG00000130997 CGP 9606 4:2059512-2242121
GeneTranscriptPositionBiotype
ENSG00000130997 (POLN)
polymerase (DNA directed) nu 		ENST00000382865 (POLN-201) 2071918-2229231 protein_coding
ENST00000503371 (POLN-005) 2071922-2077058 processed_transcript
ENST00000503601 (POLN-010) 2081396-2090305 retained_intron
ENST00000506518 (POLN-007) 2208327-2232143 processed_transcript
ENST00000508568 (POLN-006) 2081110-2083010 processed_transcript
ENST00000509623 (POLN-013) 2078485-2081041 processed_transcript
ENST00000510344 (POLN-008) 2156497-2159211 retained_intron
ENST00000511098 (POLN-004) 2071950-2179387 protein_coding
ENST00000511777 (POLN-014) 2071960-2081053 retained_intron
ENST00000511885 (POLN-001) 2071918-2242121 protein_coding
ENST00000514521 (POLN-012) 2071960-2076447 processed_transcript
ENST00000514858 (POLN-002) 2078492-2208111 retained_intron
ENST00000515357 (POLN-003) 2156394-2242121 processed_transcript
ENSG00000185818 (NAT8L)
N-acetyltransferase 8-like (GCN5-related, putative) 		ENST00000331662 (NAT8L-001) 2059812-2069089 protein_coding
ENST00000423729 (NAT8L-201) 2059512-2069088 protein_coding
ENSG00000214367 (HAUS3)
HAUS augmin-like complex, subunit 3 		ENST00000243706 (HAUS3-001) 2228349-2242133 protein_coding
ENST00000443786 (HAUS3-002) 2231841-2242164 protein_coding
ENST00000502440 (HAUS3-004) 2240916-2242128 protein_coding
ENST00000506763 (HAUS3-003) 2227464-2242121 protein_coding
ENST00000514395 (HAUS3-005) 2240847-2242121 protein_coding
ENSG00000249047 (COX6B1P5)
cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) pseudogene 5 		ENST00000509843 (COX6B1P5-001) 2234251-2234499 processed_pseudogene
ENSG00000250623 (RP11-317B7.3)
 ENST00000502636 (RP11-317B7.3-001) 2139673-2141058 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006VA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048142-ENSMUSG00000045102 CGP 10090 5:33995984-34169448
GeneTranscriptPositionBiotype
ENSMUSG00000045102 (Poln)
DNA polymerase N 		ENSMUST00000042954 (Poln-201) 34007198-34169448 protein_coding
ENSMUSG00000048142 (Nat8l)
N-acetyltransferase 8-like 		ENSMUST00000056355 (Nat8l-201) 33995984-34005916 protein_coding
ENSMUSG00000079555 (Haus3)
HAUS augmin-like complex, subunit 3 		ENSMUST00000060049 (Haus3-201) 34153921-34169445 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VA_0001ENSG00000130997ENST00000382865ENST00000503371ENST00000503601ENST00000506518ENST00000508568ENST00000509623ENST00000510344ENST00000511098ENST00000511777ENST00000511885ENST00000514521ENST00000514858ENST00000515357ENSG00000185818ENST00000331662ENST00000423729ENSG00000214367ENST00000243706ENST00000443786ENST00000502440ENST00000506763ENST00000514395ENSG00000249047ENST00000509843ENSG00000250623ENST00000502636CIL_0006VA_0002ENSMUSG00000045102ENSMUST00000042954ENSMUSG00000048142ENSMUST00000056355ENSMUSG00000079555ENSMUST00000060049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VA_0001ENSG00000130997ENST00000382865ENST00000511098ENST00000511885ENST00000515357ENSG00000185818ENST00000331662ENST00000423729ENSG00000214367ENST00000243706ENST00000443786ENST00000506763ENSG00000249047ENST00000509843ENSG00000250623ENST00000502636CIL_0006VA_0002ENSMUSG00000045102ENSMUST00000042954ENSMUSG00000048142ENSMUST00000056355ENSMUSG00000079555ENSMUST00000060049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130997 ENST00000382865 N/A N/A N/A 1.443±0.00 N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000503371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511098 N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A 0.664±0.00 N/A N/A N/A
ENST00000511777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.035±0.00
ENST00000514521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515357 N/A N/A N/A N/A N/A 0.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185818 ENST00000331662 12.329±0.00 0.268±0.00 0.407±0.00 31.225±28.33 31.194±30.66 0.496±0.00 0.099±0.09 6.717±0.00 0.219±0.18 0.042±0.00 0.657±0.10 1.024±1.37 0.192±0.04 11.192±2.84
ENST00000423729 5.377±0.00 N/A N/A 8.643±5.97 21.946±0.00 0.270±0.00 N/A 2.812±0.00 N/A N/A N/A 0.862±0.00 0.128±0.00 4.266±0.00
ENSG00000214367 ENST00000243706 0.464±0.00 0.382±0.00 0.274±0.00 0.727±0.07 0.855±0.00 0.243±0.10 0.321±0.03 0.373±0.04 0.673±0.52 0.417±0.17 0.310±0.00 0.687±0.12 0.407±0.23 1.331±0.23
ENST00000443786 1.250±0.00 2.862±0.00 N/A 1.200±0.33 2.449±0.70 1.456±0.07 0.588±0.42 0.801±0.19 0.901±0.31 1.781±0.19 0.554±0.34 1.558±0.69 0.909±0.15 3.322±0.96
ENST00000502440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506763 0.735±0.00 0.574±0.00 N/A 1.013±0.02 N/A 0.388±0.00 0.306±0.00 0.880±0.00 0.785±0.00 0.437±0.00 N/A 0.519±0.09 0.315±0.09 1.347±0.00
ENST00000514395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249047 ENST00000509843 0.065±0.00 N/A N/A 0.071±0.00 N/A 0.454±0.00 0.177±0.00 0.470±0.00 N/A N/A N/A 0.206±0.00 N/A N/A
ENSG00000250623 ENST00000502636 0.088±0.00 N/A N/A 0.045±0.00 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045102 ENSMUST00000042954 1.006±0.60 1.097±0.00 N/A N/A 1.825±1.25 0.067±0.03 0.327±0.09 0.292±0.17 0.043±0.02 0.292±0.11 N/A 0.717±0.27 N/A 3.937±0.51
ENSMUSG00000048142 ENSMUST00000056355 12.973±1.87 18.819±6.12 0.688±0.01 16.935±15.51 28.903±11.92 0.576±0.08 0.624±0.23 1.689±0.77 0.092±0.08 0.829±0.58 0.057±0.02 2.461±1.03 0.135±0.05 0.213±0.14
ENSMUSG00000079555 ENSMUST00000060049 2.104±0.39 N/A 2.067±0.39 3.048±0.99 2.096±0.25 0.463±0.24 0.498±0.13 0.524±0.23 3.782±4.13 0.728±0.22 1.123±0.26 3.662±2.66 7.519±2.80 3.588±2.27

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