C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-C motif) ligand 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131142 CCL25 9606 + 19:8052767-8062650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253451 CCL25-001 8052767-8062622 protein_coding
  ENST00000315626 CCL25-201 8053050-8057925 protein_coding
  ENST00000390669 CCL25-003 8053000-8062646 protein_coding
  ENST00000458625 CCL25-002 8053050-8062650 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungOvaryPlacentaTestisENST00000253451ENST00000315626ENST00000390669ENST00000458625
Transcript ID Adrenal Brain Lung Ovary Placenta Testis
ENST00000253451 N/A N/A N/A 0.196±0.00 N/A 0.196±0.00
ENST00000315626 N/A N/A N/A N/A 0.304±0.00 0.340±0.00
ENST00000390669 0.126±0.00 N/A N/A 0.113±0.00 N/A N/A
ENST00000458625 N/A 0.039±0.00 0.121±0.00 0.501±0.00 0.213±0.00 0.215±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NQ CIL_0002NQ_0001 CGP 19:7926718-8445041
CIL_0000UT CIL_0000UT_0001 CGP 19:7958579-8445041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001954 IDA positive regulation of cell-matrix adhesion
GO:0005179 TAS hormone activity
GO:0005515 IEA protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006935 TAS chemotaxis
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0008009 IDA:IEA chemokine activity
GO:0031735 IDA CCR10 chemokine receptor binding
GO:0042379 IDA chemokine receptor binding
GO:0050900 IEA leukocyte migration
GO:0060326 IDA cell chemotaxis
GO:1903237 IDA negative regulation of leukocyte tethering or rolling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000023235 Ccl25 chemokine (C-C motif) ligand 25 protein_coding Mus_musculus

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