C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131469 RPL27 9606 + 17:42998273-43002959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253788 RPL27-001 42998434-43002959 protein_coding
  ENST00000586277 RPL27-006 42998809-43002946 protein_coding
  ENST00000587478 RPL27-005 42998419-42999279 retained_intron
  ENST00000588830 RPL27-007 42998436-43002959 nonsense_mediated_decay
  ENST00000589037 RPL27-004 42998273-43002949 protein_coding
  ENST00000589913 RPL27-003 42998477-43002932 protein_coding
  ENST00000590864 RPL27-008 42999722-43002948 protein_coding
  ENST00000593262 RPL27-002 42998419-43002948 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253788ENST00000589913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253788 441.822±0.00 761.985±0.00 56.909±0.00 225.675±5.29 308.739±97.16 482.773±281.30 222.993±119.46 247.611±82.34 296.355±55.12 664.225±465.50 458.747±214.18 890.693±590.09 891.730±554.05 315.541±289.58
ENST00000589913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 96.056±0.00 N/A 18.060±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA:TAS ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0030529 IDA ribonucleoprotein complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015128 rpl27 ribosomal protein L27 protein_coding Danio_rerio
ENSMUSG00000073640 Rpl27-ps3 ribosomal protein L27, pseudogene 3 protein_coding Mus_musculus

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