C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131584 ACAP3 9606 - 1:1292376-1309609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353662 ACAP3-201 1293564-1303260 protein_coding
  ENST00000354700 ACAP3-001 1292376-1308018 protein_coding
  ENST00000354980 ACAP3-012 1300196-1307821 nonsense_mediated_decay
  ENST00000379037 ACAP3-009 1296436-1298265 processed_transcript
  ENST00000438966 ACAP3-005 1303210-1307818 processed_transcript
  ENST00000467278 ACAP3-003 1292870-1298955 retained_intron
  ENST00000470659 ACAP3-010 1294499-1295008 retained_intron
  ENST00000472541 ACAP3-002 1298744-1309609 retained_intron
  ENST00000476572 ACAP3-011 1296466-1299617 retained_intron
  ENST00000478065 ACAP3-007 1301448-1304901 retained_intron
  ENST00000479108 ACAP3-006 1301856-1307830 retained_intron
  ENST00000492936 ACAP3-004 1292390-1305929 retained_intron
  ENST00000493992 ACAP3-008 1297837-1298241 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000353662ENST00000354700ENST00000467278ENST00000472541
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000353662 2.249±0.00 19.495±0.00 N/A N/A N/A N/A N/A N/A 65.187±0.00 7.703±0.00 N/A
ENST00000354700 N/A 13.266±3.50 16.460±0.00 30.621±0.00 5.430±4.39 13.115±0.00 4.706±1.09 1.689±0.00 27.428±16.39 9.939±2.75 16.414±0.00
ENST00000467278 N/A N/A 3.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472541 N/A N/A 3.887±0.00 N/A N/A N/A N/A N/A 6.522±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059X CIL_00059X_0002 CGP 1:1292376-1311677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012184 zgc:162872 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein_coding Danio_rerio
ENSDARG00000039386 acap3b ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b protein_coding Danio_rerio
ENSDARG00000075990 acap3a ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a protein_coding Danio_rerio
ENSMUSG00000029033 Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein_coding Mus_musculus

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