C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131848 ZSCAN5A 9606 - 19:56219670-56368383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000391713 ZSCAN5A-002 56219670-56228290 protein_coding
  ENST00000585670 ZSCAN5A-015 56280602-56314793 processed_transcript
  ENST00000586031 ZSCAN5A-011 56266218-56266761 processed_transcript
  ENST00000587075 ZSCAN5A-016 56283345-56313380 processed_transcript
  ENST00000587340 ZSCAN5A-004 56221312-56368383 protein_coding
  ENST00000587492 ZSCAN5A-005 56221487-56314925 protein_coding
  ENST00000587614 ZSCAN5A-014 56296068-56314839 processed_transcript
  ENST00000588442 ZSCAN5A-020 56224920-56314839 protein_coding
  ENST00000588955 ZSCAN5A-009 56224793-56314513 protein_coding
  ENST00000589279 ZSCAN5A-021 56274539-56314833 processed_transcript
  ENST00000590675 ZSCAN5A-017 56263218-56313387 processed_transcript
  ENST00000591078 ZSCAN5A-013 56274504-56314859 processed_transcript
  ENST00000592101 ZSCAN5A-003 56224322-56225429 retained_intron
  ENST00000592355 ZSCAN5A-001 56221312-56228311 protein_coding
  ENST00000592509 ZSCAN5A-008 56224731-56314788 protein_coding
  ENST00000592679 ZSCAN5A-010 56224932-56314828 protein_coding
  ENST00000593106 ZSCAN5A-019 56222058-56314842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000585670ENST00000586031ENST00000587492ENST00000592355ENST00000593106
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000585670 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.600±0.00 N/A N/A
ENST00000586031 0.311±0.00 0.842±0.00 0.646±0.00 0.598±0.10 0.368±0.00 0.396±0.00 0.466±0.00 0.219±0.19 0.030±0.00 0.545±0.00 0.230±0.23 0.145±0.03
ENST00000587492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.345±0.00 14.491±3.64
ENST00000592355 N/A N/A N/A N/A 0.655±0.00 N/A N/A N/A N/A N/A N/A 8.740±0.00
ENST00000593106 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.975±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058028 Zscan5b zinc finger and SCAN domain containing 5B protein_coding Mus_musculus

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