C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 5B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058028 Zscan5b 10090 + 7:6222278-6239423 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072662 Zscan5b-001 6222278-6239423 protein_coding
  ENSMUST00000155314 Zscan5b-002 6222295-6231404 protein_coding
  ENSMUST00000165445 Zscan5b-201 6230179-6239190 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaTestisENSMUST00000072662ENSMUST00000155314ENSMUST00000165445
Transcript ID Kidney Placenta Testis
ENSMUST00000072662 0.027±0.01 0.003±0.00 0.305±0.01
ENSMUST00000155314 N/A N/A 0.964±0.31
ENSMUST00000165445 N/A N/A 0.662±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046V CIL_00046V_0002 CGP 7:6197090-6239423
CIL_0001BU CIL_0001BU_0002 CGP 7:6222278-6282066

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131848 ZSCAN5A zinc finger and SCAN domain containing 5A protein_coding Homo_sapiens
ENSG00000197213 ZSCAN5B zinc finger and SCAN domain containing 5B protein_coding Homo_sapiens
ENSG00000204532 ZSCAN5C zinc finger and SCAN domain containing 5C protein_coding Homo_sapiens
ENSG00000267908 ZSCAN5DP zinc finger and SCAN domain containing 5D protein_coding Homo_sapiens

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