C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 19 open reading frame 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131943 C19orf12 9606 - 19:29698886-29715789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323670 C19orf12-001 29700814-29715254 protein_coding
  ENST00000342680 C19orf12-005 29702842-29715275 nonsense_mediated_decay
  ENST00000392275 C19orf12-004 29702341-29715457 processed_transcript
  ENST00000392276 C19orf12-002 29701163-29715221 protein_coding
  ENST00000392278 C19orf12-003 29702403-29715056 protein_coding
  ENST00000591243 C19orf12-010 29702819-29708640 protein_coding
  ENST00000592153 C19orf12-009 29701689-29715224 protein_coding
  ENST00000614091 C19orf12-201 29698886-29715789 protein_coding
  ENST00000623113 C19orf12-202 29698886-29715056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323670ENST00000392276ENST00000592153ENST00000614091ENST00000623113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323670 N/A N/A N/A N/A 3.844±3.00 0.998±0.00 1.672±1.25 1.126±0.00 N/A N/A 2.389±0.00 2.659±0.06 1.082±0.21 N/A
ENST00000392276 8.903±0.00 4.997±0.00 5.380±0.00 7.606±1.29 12.870±8.09 3.128±1.08 6.395±4.87 6.900±3.01 5.547±3.87 4.044±0.56 7.000±0.00 8.703±4.15 4.737±2.20 3.877±2.13
ENST00000592153 7.836±0.00 N/A 15.095±0.00 10.491±0.00 N/A 4.353±2.10 1.270±0.00 4.074±0.00 7.425±0.00 1.712±0.35 27.763±0.00 13.658±2.23 3.351±0.44 N/A
ENST00000614091 N/A 0.738±0.00 N/A 1.505±0.00 N/A N/A N/A 1.018±0.00 N/A 0.691±0.00 0.812±0.00 2.183±0.00 N/A 0.709±0.00
ENST00000623113 3.307±0.00 1.909±0.00 N/A 3.151±0.34 3.834±2.65 0.739±0.26 1.587±0.79 1.531±0.25 2.403±1.37 0.489±0.00 2.077±0.00 2.327±0.68 0.874±0.07 0.971±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TZ CIL_0008TZ_0001 VISTA 19:29588658-30189738

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058857 C18H19orf12 (1 of 3) chromosome 19 open reading frame 12 protein_coding Danio_rerio
ENSDARG00000088500 C7H19orf12 (2 of 3) chromosome 19 open reading frame 12 protein_coding Danio_rerio
ENSDARG00000092703 C7H19orf12 (3 of 3) chromosome 19 open reading frame 12 protein_coding Danio_rerio
ENSMUSG00000054676 1600014C10Rik RIKEN cDNA 1600014C10 gene protein_coding Mus_musculus

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