C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box helicase 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132153 DHX30 9606 + 3:47802909-47850195 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348968 DHX30-005 47803165-47850193 protein_coding
  ENST00000395745 DHX30-003 47803134-47850192 nonsense_mediated_decay
  ENST00000415400 DHX30-011 47803107-47824863 nonsense_mediated_decay
  ENST00000441384 DHX30-002 47803138-47842679 nonsense_mediated_decay
  ENST00000445061 DHX30-001 47802928-47850193 protein_coding
  ENST00000446256 DHX30-201 47810684-47850195 protein_coding
  ENST00000457607 DHX30-007 47825028-47850187 protein_coding
  ENST00000461905 DHX30-014 47845502-47846404 processed_transcript
  ENST00000470959 DHX30-013 47827373-47831128 processed_transcript
  ENST00000471082 DHX30-012 47825912-47829135 processed_transcript
  ENST00000472718 DHX30-004 47802909-47816972 retained_intron
  ENST00000474183 DHX30-015 47847777-47848996 retained_intron
  ENST00000476446 DHX30-008 47802950-47822310 processed_transcript
  ENST00000492893 DHX30-010 47803125-47825004 processed_transcript
  ENST00000619982 DHX30-202 47819227-47850195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348968ENST00000395745ENST00000441384ENST00000445061ENST00000446256ENST00000457607ENST00000474183ENST00000619982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348968 N/A 4.469±0.00 N/A N/A 2.778±0.00 0.465±0.00 1.173±0.73 2.891±0.00 N/A 2.897±0.00 N/A N/A 2.458±0.00 10.516±0.00
ENST00000395745 2.090±0.00 N/A N/A 5.223±2.07 N/A N/A 2.370±0.00 3.346±0.00 N/A N/A N/A 4.711±0.00 2.528±0.00 13.840±0.00
ENST00000441384 N/A N/A N/A N/A 2.180±0.00 N/A 0.708±0.00 N/A 1.469±0.00 1.174±0.00 N/A N/A N/A N/A
ENST00000445061 N/A N/A N/A 2.064±0.00 N/A 2.542±0.00 1.036±0.00 N/A 1.043±0.00 2.036±0.00 4.035±0.00 4.439±0.00 2.906±0.00 N/A
ENST00000446256 4.821±0.00 N/A 3.087±0.00 2.852±0.00 2.268±1.31 3.140±0.00 N/A N/A 1.273±0.00 1.305±0.00 3.562±0.00 6.885±0.59 4.747±0.00 36.035±0.00
ENST00000457607 7.813±0.00 18.585±0.00 1.248±0.00 17.247±0.00 5.386±2.90 5.455±4.84 4.649±3.32 8.793±5.11 5.464±4.97 5.013±4.43 9.017±5.40 8.775±5.68 10.216±0.66 33.528±0.00
ENST00000474183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.166±0.00 19.663±0.00 101.574±0.00
ENST00000619982 N/A N/A N/A N/A N/A 1.079±0.00 N/A N/A N/A N/A N/A 7.720±0.00 9.598±6.60 38.360±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003682 IDA chromatin binding
GO:0003725 IDA double-stranded RNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077839 DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30 protein_coding Danio_rerio
ENSMUSG00000032480 Dhx30 DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein_coding Mus_musculus

Loading