C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box polypeptide 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032480 Dhx30 10090 - 9:110084320-110117830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035056 Dhx30-004 110084320-110117422 protein_coding
  ENSMUST00000062368 Dhx30-009 110084320-110101087 protein_coding
  ENSMUST00000111991 Dhx30-005 110084322-110117411 protein_coding
  ENSMUST00000127744 Dhx30-006 110084321-110117437 protein_coding
  ENSMUST00000128639 Dhx30-014 110115422-110117108 processed_transcript
  ENSMUST00000128979 Dhx30-007 110084321-110109995 retained_intron
  ENSMUST00000133529 Dhx30-017 110087943-110091471 retained_intron
  ENSMUST00000136857 Dhx30-008 110089801-110110596 retained_intron
  ENSMUST00000136969 Dhx30-002 110084323-110117303 protein_coding
  ENSMUST00000138940 Dhx30-016 110098749-110115306 protein_coding
  ENSMUST00000142911 Dhx30-001 110084320-110117830 protein_coding
  ENSMUST00000144180 Dhx30-013 110098837-110117087 protein_coding
  ENSMUST00000145932 Dhx30-011 110113078-110117431 processed_transcript
  ENSMUST00000148287 Dhx30-003 110084320-110117433 protein_coding
  ENSMUST00000148445 Dhx30-018 110086319-110087454 retained_intron
  ENSMUST00000148526 Dhx30-010 110115114-110117632 processed_transcript
  ENSMUST00000149199 Dhx30-012 110109114-110117419 protein_coding
  ENSMUST00000149251 Dhx30-015 110093068-110116784 protein_coding
  ENSMUST00000165596 Dhx30-201 110084321-110115077 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035056ENSMUST00000062368ENSMUST00000127744ENSMUST00000128979ENSMUST00000136969ENSMUST00000142911ENSMUST00000148287ENSMUST00000165596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035056 N/A N/A 4.847±0.90 9.933±1.72 N/A N/A 1.737±0.02 2.306±0.00 2.279±0.70 3.596±0.00 1.422±0.27 7.075±2.17 4.673±0.98 12.114±2.65
ENSMUST00000062368 8.841±2.71 22.287±3.19 4.094±0.59 N/A 13.455±1.29 7.527±1.48 4.060±0.44 6.046±0.96 4.917±1.39 5.980±1.07 4.510±0.99 21.175±6.06 4.585±0.89 10.684±1.22
ENSMUST00000127744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.829±0.38 N/A N/A N/A
ENSMUST00000128979 N/A N/A N/A N/A 4.425±0.00 2.133±0.11 1.800±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136969 N/A N/A N/A 8.446±2.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142911 N/A 5.172±1.15 N/A N/A 5.792±0.00 2.516±0.53 1.431±0.00 N/A 2.048±0.07 N/A N/A 7.023±0.00 N/A 8.220±0.11
ENSMUST00000148287 4.989±1.45 N/A 3.248±0.58 8.978±1.52 4.566±0.71 N/A 1.851±0.31 3.650±0.94 1.804±0.67 3.827±0.25 0.849±0.00 4.471±0.00 1.849±0.00 N/A
ENSMUST00000165596 9.618±1.85 N/A 6.733±1.03 23.128±7.46 6.110±0.95 6.557±1.79 4.968±1.38 6.658±2.05 3.965±0.96 7.425±0.42 N/A 19.233±6.70 7.803±2.83 25.202±6.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0002 VISTA 9:109592964-110196468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0003725 ISO double-stranded RNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0042645 ISS mitochondrial nucleoid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077839 DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30 protein_coding Danio_rerio
ENSG00000132153 DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30 protein_coding Homo_sapiens

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