C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclic nucleotide gated channel alpha 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132259 CNGA4 9606 + 11:6234765-6244429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379936 CNGA4-001 6239092-6244429 protein_coding
  ENST00000533426 CNGA4-003 6234765-6241991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungOvaryPlacentaTestisENST00000379936ENST00000533426
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Ovary Placenta Testis
ENST00000379936 0.011±0.00 0.035±0.00 0.114±0.00 N/A 0.237±0.00 0.702±0.00 0.074±0.03 0.079±0.02 1.482±0.00
ENST00000533426 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R5 CIL_0003R5_0002 CGP 11:6211335-6244429
CIL_0004B5 CIL_0004B5_0001 CGP 11:6234765-6272127

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007603 IBA phototransduction, visible light
GO:0007608 IEA sensory perception of smell
GO:0016020 IEA membrane
GO:0030552 IEA cAMP binding
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069383 cnga4 cyclic nucleotide gated channel alpha 4 protein_coding Danio_rerio
ENSMUSG00000030897 Cnga4 cyclic nucleotide gated channel alpha 4 protein_coding Mus_musculus

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