C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379936 CNGA4-001 ENSG00000132259 9606 + 11:6239092-6244429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungOvaryPlacentaTestisENST00000379936
Transcript ID Adipose Adrenal Brain Kidney Lung Ovary Placenta Testis
ENST00000379936 0.011±0.00 0.035±0.00 0.114±0.00 0.237±0.00 0.702±0.00 0.074±0.03 0.079±0.02 1.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R5 CIL_0003R5_0002 CGP 11:6211335-6244429
CIL_0004B5 CIL_0004B5_0001 CGP 11:6234765-6272127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007603 IBA phototransduction, visible light
GO:0007608 IEA sensory perception of smell
GO:0016020 IEA membrane
GO:0030552 IEA cAMP binding
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033187 Cnga4-201 protein_coding Mus_musculus 0 2154

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