C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MYB binding protein (P160) 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132382 MYBBP1A 9606 - 17:4538897-4555631 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254718 MYBBP1A-001 4538902-4555631 protein_coding
  ENST00000381556 MYBBP1A-201 4538897-4555386 protein_coding
  ENST00000570986 MYBBP1A-004 4552183-4555358 retained_intron
  ENST00000571354 MYBBP1A-010 4544902-4545932 retained_intron
  ENST00000571368 MYBBP1A-006 4538902-4543299 retained_intron
  ENST00000572759 MYBBP1A-011 4539523-4545126 protein_coding
  ENST00000573116 MYBBP1A-002 4538902-4554912 protein_coding
  ENST00000573175 MYBBP1A-008 4547685-4550177 retained_intron
  ENST00000573723 MYBBP1A-009 4538944-4550061 protein_coding
  ENST00000574167 MYBBP1A-013 4539439-4541898 retained_intron
  ENST00000574547 MYBBP1A-005 4539363-4544695 retained_intron
  ENST00000574934 MYBBP1A-007 4538906-4542423 retained_intron
  ENST00000575662 MYBBP1A-012 4540436-4542100 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254718ENST00000381556ENST00000571368ENST00000573116ENST00000574547ENST00000574934
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254718 7.404±0.00 10.416±0.00 7.775±0.00 9.150±0.00 5.796±0.00 4.029±0.00 N/A 1.825±1.41 N/A 7.258±0.00 9.673±4.59 2.756±0.84 5.250±2.43
ENST00000381556 4.240±0.00 9.635±0.00 N/A 0.452±0.00 1.111±0.00 N/A 9.763±0.00 N/A 7.452±0.00 3.212±0.00 3.608±2.92 2.663±0.00 N/A
ENST00000571368 N/A N/A 2.042±0.00 N/A N/A 0.289±0.00 1.188±0.00 3.086±2.02 N/A 4.962±0.00 N/A N/A N/A
ENST00000573116 N/A N/A 1.126±0.00 N/A N/A 0.516±0.00 1.239±0.00 N/A N/A 2.183±1.69 8.589±0.00 2.909±0.00 4.795±0.88
ENST00000574547 N/A N/A 1.967±0.00 5.298±4.27 N/A N/A 0.895±0.00 N/A 1.213±0.00 0.796±0.00 8.106±7.13 N/A 10.468±0.00
ENST00000574934 N/A N/A N/A 0.790±0.00 0.604±0.00 N/A N/A N/A N/A N/A 7.474±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006913 ISS nucleocytoplasmic transport
GO:0008134 TAS transcription factor binding
GO:0016020 IDA membrane
GO:0022904 IEA respiratory electron transport chain
GO:0042149 IDA cellular response to glucose starvation
GO:0042564 ISS NLS-dependent protein nuclear import complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0071158 IMP positive regulation of cell cycle arrest
GO:0071897 IEA DNA biosynthetic process
GO:0072332 IMP intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028323 mybbp1a MYB binding protein (P160) 1a protein_coding Danio_rerio
ENSDARG00000078214 MYBBP1A (2 of 2) MYB binding protein (P160) 1a protein_coding Danio_rerio
ENSMUSG00000040463 Mybbp1a MYB binding protein (P160) 1a protein_coding Mus_musculus

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