C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MYB binding protein (P160) 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381556 MYBBP1A-201 ENSG00000132382 9606 - 17:4538897-4555386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryPlacentaENST00000381556
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Placenta
ENST00000381556 4.240±0.00 9.635±0.00 0.452±0.00 1.111±0.00 9.763±0.00 7.452±0.00 3.212±0.00 3.608±2.92 2.663±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006913 ISS nucleocytoplasmic transport
GO:0008134 TAS transcription factor binding
GO:0016020 IDA membrane
GO:0022904 IEA respiratory electron transport chain
GO:0042149 IDA cellular response to glucose starvation
GO:0042564 ISS NLS-dependent protein nuclear import complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0071158 IMP positive regulation of cell cycle arrest
GO:0071897 IEA DNA biosynthetic process
GO:0072332 IMP intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045633 Mybbp1a-001 protein_coding Mus_musculus 0 2045
ENSMUST00000152894 Mybbp1a-002 retained_intron Mus_musculus 0 1323
ENSMUST00000162048 Mybbp1a-008 retained_intron Mus_musculus 0 994
ENSMUST00000144374 Mybbp1a-006 retained_intron Mus_musculus 0 363
ENSMUST00000144923 Mybbp1a-004 retained_intron Mus_musculus 1.00053e-42 180
ENSMUST00000129274 Spns2-002 retained_intron Mus_musculus 4e-27 128
ENSMUST00000045303 Spns2-001 protein_coding Mus_musculus 4e-27 128
ENSMUST00000156833 Mybbp1a-003 retained_intron Mus_musculus 4e-22 111

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