C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132467 UTP3 9606 + 4:70688479-70690551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254803 UTP3-001 70688479-70690551 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254803 8.159±0.00 16.524±0.00 0.684±0.00 6.107±4.45 5.795±3.78 5.016±3.39 3.001±2.51 8.695±7.54 4.196±2.29 2.880±1.03 2.897±2.10 10.092±5.55 8.852±3.08 8.132±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D5 CIL_0000D5_0001 CGP 4:70655541-70690551
CIL_0000D6 CIL_0000D6_0001 CGP 4:70688479-70807315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0007420 ISS brain development
GO:0016568 IEA chromatin modification
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056720 utp3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000070697 Utp3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) protein_coding Mus_musculus

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