C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132467-ENSG00000018189 CGP 9606 4:70688479-70807315
GeneTranscriptPositionBiotype
ENSG00000018189 (RUFY3)
RUN and FYVE domain containing 3 		ENST00000226328 (RUFY3-001) 70722011-70793557 protein_coding
ENST00000381006 (RUFY3-002) 70721995-70807315 protein_coding
ENST00000417478 (RUFY3-005) 70704801-70790082 protein_coding
ENST00000502653 (RUFY3-003) 70734434-70807102 protein_coding
ENST00000503025 (RUFY3-010) 70794673-70806567 retained_intron
ENST00000503876 (RUFY3-007) 70704424-70768622 protein_coding
ENST00000504805 (RUFY3-009) 70784866-70800182 nonsense_mediated_decay
ENST00000507333 (RUFY3-015) 70793876-70806816 processed_transcript
ENST00000512103 (RUFY3-012) 70788939-70806871 nonsense_mediated_decay
ENST00000512331 (RUFY3-016) 70799405-70806748 processed_transcript
ENST00000513593 (RUFY3-013) 70802983-70806794 processed_transcript
ENST00000513597 (RUFY3-004) 70734346-70775206 protein_coding
ENST00000514898 (RUFY3-008) 70704204-70705230 protein_coding
ENST00000515442 (RUFY3-014) 70802871-70806596 processed_transcript
ENST00000515479 (RUFY3-011) 70799448-70806553 retained_intron
ENSG00000132467 (UTP3)
UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) 		ENST00000254803 (UTP3-001) 70688479-70690551 protein_coding
ENSG00000207058 (RNU6-784P)
RNA, U6 small nuclear 784, pseudogene 		ENST00000384330 (RNU6-784P-201) 70703018-70703123 snRNA
ENSG00000207448 (RNU6-520P)
RNA, U6 small nuclear 520, pseudogene 		ENST00000384717 (RNU6-520P-201) 70701755-70701858 snRNA
CIL_0000D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070697-ENSMUSG00000029291 CGP 10090 5:88554483-88642671
GeneTranscriptPositionBiotype
ENSMUSG00000029291 (Rufy3)
RUN and FYVE domain containing 3 		ENSMUST00000031229 (Rufy3-201) 88583574-88642671 protein_coding
ENSMUSG00000070697 (Utp3)
UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) 		ENSMUST00000090413 (Utp3-201) 88554483-88556083 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D6_0001ENSG00000018189ENST00000226328ENST00000381006ENST00000417478ENST00000502653ENST00000503025ENST00000503876ENST00000504805ENST00000507333ENST00000512103ENST00000512331ENST00000513593ENST00000513597ENST00000514898ENST00000515442ENST00000515479ENSG00000132467ENST00000254803ENSG00000207058ENST00000384330ENSG00000207448ENST00000384717CIL_0000D6_0002ENSMUSG00000029291ENSMUST00000031229ENSMUSG00000070697ENSMUST00000090413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D6_0001ENSG00000018189ENST00000226328ENST00000381006ENST00000417478ENST00000502653ENST00000504805ENSG00000132467ENST00000254803ENSG00000207058ENST00000384330ENSG00000207448ENST00000384717CIL_0000D6_0002ENSMUSG00000029291ENSMUST00000031229ENSMUSG00000070697ENSMUST00000090413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000018189 ENST00000226328 2.052±0.00 N/A 1.665±0.00 21.085±11.31 1.097±0.00 N/A 0.961±0.00 0.742±0.00 N/A 3.482±0.00 1.087±0.00 3.300±0.00 N/A 4.878±0.00
ENST00000381006 2.046±0.00 N/A 1.139±0.00 N/A 1.217±0.00 2.096±0.00 0.880±0.03 1.306±0.00 4.316±0.00 1.514±0.00 N/A 5.644±1.09 1.170±0.00 N/A
ENST00000417478 N/A 2.538±0.00 N/A N/A N/A 2.398±0.00 1.143±0.00 N/A N/A 2.432±0.00 N/A N/A N/A N/A
ENST00000502653 1.779±0.00 N/A 1.390±0.00 N/A N/A N/A 0.906±0.00 2.039±0.00 0.907±0.00 N/A 1.664±0.00 7.021±0.00 3.815±2.13 24.278±0.00
ENST00000503025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.367±0.00 9.535±0.00 9.312±0.00 36.614±0.00
ENST00000507333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132467 ENST00000254803 8.159±0.00 16.524±0.00 0.684±0.00 6.107±4.45 5.795±3.78 5.016±3.39 3.001±2.51 8.695±7.54 4.196±2.29 2.880±1.03 2.897±2.10 10.092±5.55 8.852±3.08 8.132±1.51
ENSG00000207058 ENST00000384330 N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207448 ENST00000384717 N/A 0.561±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029291 ENSMUST00000031229 0.505±0.37 N/A 0.900±0.00 49.809±14.08 0.108±0.03 1.025±0.00 0.141±0.04 N/A N/A 0.252±0.00 0.382±0.36 1.285±0.33 N/A N/A
ENSMUSG00000070697 ENSMUST00000090413 9.560±0.00 7.983±1.04 17.178±0.15 14.531±7.06 8.357±3.09 7.785±0.86 4.016±0.34 6.062±2.08 13.130±8.05 8.105±0.35 11.495±1.43 15.848±12.29 28.747±14.25 11.303±9.60

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