C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132972 RNF17 9606 + 13:24764152-24879921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255324 RNF17-003 24764152-24879921 protein_coding
  ENST00000255325 RNF17-004 24764201-24824377 protein_coding
  ENST00000255326 RNF17-005 24764201-24796242 processed_transcript
  ENST00000339524 RNF17-002 24843879-24879921 protein_coding
  ENST00000418120 RNF17-001 24803734-24874261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryPlacentaTestisENST00000255324ENST00000255325ENST00000339524ENST00000418120
Transcript ID Adrenal Colon Ovary Placenta Testis
ENST00000255324 N/A N/A 0.017±0.01 0.068±0.00 8.163±3.17
ENST00000255325 N/A N/A 0.010±0.00 N/A N/A
ENST00000339524 N/A 0.037±0.00 0.023±0.02 0.189±0.10 6.690±0.40
ENST00000418120 0.020±0.00 N/A N/A 0.039±0.00 4.848±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MG CIL_0004MG_0001 CGP 13:24680411-24879921
CIL_0000G6 CIL_0000G6_0002 CGP 13:24764152-24922889

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007286 IEA spermatid development
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056387 rnf17 ring finger protein 17 protein_coding Danio_rerio
ENSMUSG00000000365 Rnf17 ring finger protein 17 protein_coding Mus_musculus

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