C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000G6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056387-ENSDARG00000018121 CGP 7955 9:30581938-30613216
GeneTranscriptPositionBiotype
ENSDARG00000018121 (cenpj)
centromere protein J
ENSDART00000028029 (cenpj-201) 30605117-30611295 protein_coding
ENSDART00000140876 (cenpj-001) 30605119-30613216 protein_coding
ENSDARG00000056387 (rnf17)
ring finger protein 17
ENSDART00000060225 (rnf17-201) 30597200-30604536 protein_coding
ENSDART00000123679 (rnf17-202) 30596724-30604165 protein_coding
ENSDART00000132295 (rnf17-001) 30581938-30604536 protein_coding
CIL_0000G6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132972-ENSG00000151849 CGP 9606 13:24764152-24922889
GeneTranscriptPositionBiotype
ENSG00000132972 (RNF17)
ring finger protein 17
ENST00000255324 (RNF17-003) 24764152-24879921 protein_coding
ENST00000255325 (RNF17-004) 24764201-24824377 protein_coding
ENST00000255326 (RNF17-005) 24764201-24796242 processed_transcript
ENST00000339524 (RNF17-002) 24843879-24879921 protein_coding
ENST00000418120 (RNF17-001) 24803734-24874261 protein_coding
ENSG00000151849 (CENPJ)
centromere protein J
ENST00000381884 (CENPJ-001) 24883033-24922880 protein_coding
ENST00000418179 (CENPJ-002) 24889170-24903994 protein_coding
ENST00000471870 (CENPJ-004) 24884330-24889355 processed_transcript
ENST00000493190 (CENPJ-003) 24885290-24886079 processed_transcript
ENST00000545981 (CENPJ-201) 24883163-24922810 protein_coding
ENST00000616936 (CENPJ-202) 24882284-24922889 protein_coding
CIL_0000G6_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000365-ENSMUSG00000064128 CGP 10090 14:56402697-56571846
GeneTranscriptPositionBiotype
ENSMUSG00000000365 (Rnf17)
ring finger protein 17
ENSMUST00000095793 (Rnf17-201) 56402697-56525032 protein_coding
ENSMUSG00000064128 (Cenpj)
centromere protein J
ENSMUST00000065302 (Cenpj-001) 56526761-56571846 protein_coding
ENSMUSG00000089170 (Gm22431)
predicted gene, 22431
ENSMUST00000158545 (Gm22431-201) 56535971-56536077 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G6_0001ENSDARG00000018121ENSDART00000028029ENSDART00000140876ENSDARG00000056387ENSDART00000060225ENSDART00000123679ENSDART00000132295CIL_0000G6_0002ENSG00000132972ENST00000255324ENST00000255325ENST00000255326ENST00000339524ENST00000418120ENSG00000151849ENST00000381884ENST00000418179ENST00000471870ENST00000493190ENST00000545981ENST00000616936CIL_0000G6_0003ENSMUSG00000000365ENSMUST00000095793ENSMUSG00000064128ENSMUST00000065302ENSMUSG00000089170ENSMUST00000158545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G6_0001ENSDARG00000018121ENSDART00000028029ENSDART00000140876ENSDARG00000056387ENSDART00000060225ENSDART00000132295CIL_0000G6_0002ENSG00000132972ENST00000255324ENST00000255325ENST00000339524ENST00000418120ENSG00000151849ENST00000381884ENST00000471870ENST00000545981CIL_0000G6_0003ENSMUSG00000000365ENSMUST00000095793ENSMUSG00000064128ENSMUST00000065302ENSMUSG00000089170ENSMUST00000158545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018121 ENSDART00000028029 N/A N/A N/A 0.112±0.05 N/A N/A 0.231±0.11 1.134±0.00 N/A N/A 0.122±0.00 N/A N/A N/A
ENSDART00000140876 N/A N/A N/A 0.301±0.00 N/A N/A 0.309±0.00 N/A 0.055±0.00 N/A N/A N/A N/A N/A
ENSDARG00000056387 ENSDART00000060225 N/A N/A N/A 0.473±0.14 N/A N/A 0.072±0.00 3.666±0.50 N/A N/A 0.157±0.00 N/A N/A N/A
ENSDART00000123679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132295 N/A N/A N/A 0.219±0.14 N/A N/A 0.036±0.02 7.509±0.00 0.357±0.00 N/A 0.018±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132972 ENST00000255324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.01 0.068±0.00 8.163±3.17
ENST00000255325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A
ENST00000255326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000339524 N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A 0.023±0.02 0.189±0.10 6.690±0.40
ENST00000418120 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 4.848±0.00
ENSG00000151849 ENST00000381884 0.664±0.00 0.815±0.00 N/A 0.900±0.23 0.704±0.08 0.434±0.16 0.511±0.42 0.792±0.00 0.051±0.00 0.491±0.00 0.256±0.00 2.499±1.80 0.962±0.62 11.158±4.30
ENST00000418179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471870 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A N/A N/A
ENST00000493190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545981 N/A 0.177±0.00 0.408±0.00 N/A N/A N/A N/A 0.093±0.00 0.222±0.08 N/A 0.166±0.00 1.168±0.00 0.281±0.00 N/A
ENST00000616936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000365 ENSMUST00000095793 0.083±0.04 0.097±0.06 0.074±0.01 0.061±0.04 0.094±0.00 N/A 0.028±0.02 0.016±0.01 0.172±0.13 0.013±0.00 0.012±0.00 0.200±0.16 1.254±0.74 11.251±4.19
ENSMUSG00000064128 ENSMUST00000065302 0.221±0.13 0.338±0.09 0.683±0.13 2.052±0.37 0.389±0.17 0.323±0.15 0.322±0.14 0.362±0.09 1.122±1.11 0.514±0.00 0.315±0.08 0.741±0.21 2.886±1.73 0.945±0.43
ENSMUSG00000089170 ENSMUST00000158545 N/A N/A 58.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 61.160±19.47 67.977±13.32 88.935±0.00

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