C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SPOC domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134668 SPOCD1 9606 - 1:31790422-31816051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257100 SPOCD1-001 31790422-31816022 protein_coding
  ENST00000360482 SPOCD1-007 31790424-31816051 protein_coding
  ENST00000452755 SPOCD1-013 31790477-31798839 protein_coding
  ENST00000460061 SPOCD1-004 31794516-31798631 retained_intron
  ENST00000468720 SPOCD1-006 31794496-31798771 retained_intron
  ENST00000473361 SPOCD1-005 31790428-31798615 retained_intron
  ENST00000485944 SPOCD1-002 31794516-31814129 retained_intron
  ENST00000525930 SPOCD1-010 31800460-31816020 protein_coding
  ENST00000528579 SPOCD1-015 31793319-31798716 protein_coding
  ENST00000528791 SPOCD1-009 31799809-31816022 protein_coding
  ENST00000529396 SPOCD1-011 31799402-31816002 protein_coding
  ENST00000531039 SPOCD1-012 31794227-31799892 retained_intron
  ENST00000532604 SPOCD1-014 31794018-31798631 retained_intron
  ENST00000533231 SPOCD1-008 31790483-31815375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257100ENST00000360482ENST00000452755ENST00000460061ENST00000468720ENST00000473361ENST00000525930ENST00000528579ENST00000531039ENST00000533231
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257100 N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000360482 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 0.024±0.01 N/A
ENST00000452755 N/A N/A 0.219±0.00 0.036±0.00 N/A 0.090±0.00 N/A 2.110±0.00 N/A 0.156±0.00 0.214±0.01 N/A
ENST00000460061 N/A N/A 0.051±0.00 N/A N/A 0.112±0.00 0.357±0.00 N/A 0.079±0.00 0.079±0.01 0.052±0.02 N/A
ENST00000468720 0.105±0.00 0.170±0.08 N/A 0.035±0.00 0.109±0.00 N/A 0.055±0.00 0.573±0.33 N/A 0.126±0.00 N/A 0.844±0.00
ENST00000473361 N/A N/A 0.307±0.00 N/A 0.041±0.00 N/A 0.314±0.00 0.737±0.00 0.011±0.00 0.186±0.00 N/A N/A
ENST00000525930 N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528579 0.325±0.00 N/A 0.658±0.00 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531039 N/A N/A N/A N/A N/A N/A N/A 1.074±0.00 N/A N/A N/A 5.684±0.00
ENST00000533231 N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.068±0.04 N/A 2.184±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010923 IDA negative regulation of phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000028784 Spocd1 SPOC domain containing 1 protein_coding Mus_musculus

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