C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin polyglutamylase complex subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134779 TPGS2 9606 - 18:36777647-36829216 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334295 TPGS2-001 36794106-36829195 protein_coding
  ENST00000383056 TPGS2-002 36796072-36828986 protein_coding
  ENST00000585635 TPGS2-007 36798467-36829036 nonsense_mediated_decay
  ENST00000587129 TPGS2-019 36782985-36828804 protein_coding
  ENST00000587207 TPGS2-017 36807847-36829024 nonsense_mediated_decay
  ENST00000587382 TPGS2-006 36788693-36828730 protein_coding
  ENST00000587511 TPGS2-016 36807538-36828787 retained_intron
  ENST00000588909 TPGS2-009 36818894-36828986 protein_coding
  ENST00000589049 TPGS2-005 36798018-36828781 protein_coding
  ENST00000590258 TPGS2-015 36777647-36798585 protein_coding
  ENST00000590337 TPGS2-018 36805992-36828988 protein_coding
  ENST00000590500 TPGS2-013 36796926-36807934 protein_coding
  ENST00000590652 TPGS2-014 36780024-36800262 nonsense_mediated_decay
  ENST00000590692 TPGS2-010 36800225-36828782 nonsense_mediated_decay
  ENST00000590842 TPGS2-004 36786573-36828842 protein_coding
  ENST00000591648 TPGS2-008 36818513-36829011 retained_intron
  ENST00000591823 TPGS2-011 36798378-36828773 nonsense_mediated_decay
  ENST00000591906 TPGS2-012 36786573-36818927 protein_coding
  ENST00000593035 TPGS2-003 36796072-36828963 protein_coding
  ENST00000610723 TPGS2-201 36786485-36829216 protein_coding
  ENST00000614939 TPGS2-202 36780027-36829216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334295ENST00000383056ENST00000590258ENST00000590692ENST00000590842ENST00000593035
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334295 4.041±0.00 5.672±0.00 N/A 8.059±0.00 N/A N/A N/A N/A 4.373±0.00 N/A N/A N/A N/A
ENST00000383056 11.830±0.00 18.569±0.00 24.451±0.00 27.575±0.00 N/A N/A N/A 8.787±0.00 17.342±0.00 N/A 17.260±6.74 15.276±6.89 103.235±3.24
ENST00000590258 N/A N/A N/A N/A N/A 23.041±0.00 6.382±0.00 N/A N/A 1.864±0.00 8.739±0.00 N/A N/A
ENST00000590692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 117.849±0.00
ENST00000590842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.677±0.00 13.648±3.82 N/A
ENST00000593035 8.177±0.00 N/A 13.949±1.78 N/A 26.611±0.00 N/A 18.202±0.00 N/A N/A N/A 21.726±0.00 20.515±11.45 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VO CIL_0003VO_0001 CGP 18:36297714-36829216
CIL_0008E2 CIL_0008E2_0001 VISTA 18:36600116-37201157
CIL_0002FL CIL_0002FL_0002 CGP 18:36777647-37232172

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011926 tpgs2 tubulin polyglutamylase complex subunit 2 protein_coding Danio_rerio
ENSMUSG00000024269 Tpgs2 tubulin polyglutamylase complex subunit 2 protein_coding Mus_musculus

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