C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin polyglutamylase complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593035 TPGS2-003 ENSG00000134779 9606 - 18:36796072-36828963 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyOvaryPlacentaENST00000593035
Transcript ID Adipose Brain Colon Kidney Ovary Placenta
ENST00000593035 8.177±0.00 13.949±1.78 26.611±0.00 18.202±0.00 21.726±0.00 20.515±11.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VO CIL_0003VO_0001 CGP 18:36297714-36829216
CIL_0008E2 CIL_0008E2_0001 VISTA 18:36600116-37201157
CIL_0002FL CIL_0002FL_0002 CGP 18:36777647-37232172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115817 Tpgs2-001 protein_coding Mus_musculus 0 588
ENSMUST00000148255 Tpgs2-002 protein_coding Mus_musculus 0 374

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